Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm13578-201ENSMUST00000120849 590 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm22958-201ENSMUST00000122512 184 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm26346-201ENSMUST00000157525 329 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm17366-201ENSMUST00000167629 187 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm17421-201ENSMUST00000167845 674 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm24155-201ENSMUST00000175259 110 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm28802-201ENSMUST00000188624 944 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm43856-201ENSMUST00000197004 369 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm44374-201ENSMUST00000199821 140 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm43232-201ENSMUST00000201346 364 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm44820-201ENSMUST00000207420 396 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm18597-201ENSMUST00000209519 694 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm19170-201ENSMUST00000212440 1084 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm18225-201ENSMUST00000216708 742 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 AC154417.1-201ENSMUST00000223876 476 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 AC166830.1-201ENSMUST00000224201 533 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 AC154270.1-201ENSMUST00000227226 426 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 AC158142.2-201ENSMUST00000227892 635 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm22351-201ENSMUST00000083925 107 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 AC147615.2-201ENSMUST00000219876 2154 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm44433-201ENSMUST00000203540 4832 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm37363-201ENSMUST00000192336 2233 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm37674-201ENSMUST00000194177 1834 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5□□□□□ -1.61
Rnf220Q6PDX6 Mir700-201ENSMUST00000102169 79 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm15772-201ENSMUST00000118533 438 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm14793-201ENSMUST00000118739 311 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm11826-201ENSMUST00000118781 438 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm13866-201ENSMUST00000118901 968 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm14785-201ENSMUST00000120185 539 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm6305-201ENSMUST00000121027 1012 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5□□□□□ -1.61
Rnf220Q6PDX6 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5□□□□□ -1.61
Rnf220Q6PDX6 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm22492-201ENSMUST00000157192 297 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm24733-201ENSMUST00000158863 253 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5□□□□□ -1.61
Rnf220Q6PDX6 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm24315-201ENSMUST00000177835 127 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm27148-201ENSMUST00000185086 160 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm37177-201ENSMUST00000193768 417 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm5552-201ENSMUST00000197149 515 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm42502-201ENSMUST00000198550 1089 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm43431-201ENSMUST00000198577 340 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm43015-201ENSMUST00000199087 565 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Ighv1-83-201ENSMUST00000199643 351 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5□□□□□ -1.61
Rnf220Q6PDX6 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5□□□□□ -1.61
Rnf220Q6PDX6 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC5□□□□□ -1.61
Rnf220Q6PDX6 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC5□□□□□ -1.61
Rnf220Q6PDX6 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5□□□□□ -1.61
Rnf220Q6PDX6 AC173482.2-201ENSMUST00000224044 750 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5□□□□□ -1.61
Rnf220Q6PDX6 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC5□□□□□ -1.61
Rnf220Q6PDX6 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm25515-201ENSMUST00000083858 157 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gm23795-201ENSMUST00000084006 137 ntBASIC5□□□□□ -1.61
Rnf220Q6PDX6 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5□□□□□ -1.61
Rnf220Q6PDX6 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Rnf220Q6PDX6 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC5□□□□□ -1.61
Rnf220Q6PDX6 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC5□□□□□ -1.61
Rnf220Q6PDX6 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC5□□□□□ -1.61
Rnf220Q6PDX6 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5□□□□□ -1.61
Rnf220Q6PDX6 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms