Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Ccdc88aQ5SNZ0 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC4.62□□□□□ -1.67
Ccdc88aQ5SNZ0 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ccdc88aQ5SNZ0 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Ccdc88aQ5SNZ0 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ccdc88aQ5SNZ0 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.62□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm11262-201ENSMUST00000119326 833 ntBASIC4.62□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm14776-201ENSMUST00000121029 887 ntBASIC4.62□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC4.62□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm6264-202ENSMUST00000162896 1217 ntBASIC4.62□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm44513-201ENSMUST00000206811 439 ntBASIC4.62□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm45246-201ENSMUST00000210820 367 ntBASIC4.62□□□□□ -1.67
Ccdc88aQ5SNZ0 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.62□□□□□ -1.67
Ccdc88aQ5SNZ0 Olfr1153-201ENSMUST00000052300 957 ntBASIC4.62□□□□□ -1.67
Ccdc88aQ5SNZ0 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ccdc88aQ5SNZ0 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Ccdc88aQ5SNZ0 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Ccdc88aQ5SNZ0 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm25272-201ENSMUST00000104293 128 ntBASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm22852-201ENSMUST00000177899 101 ntBASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm17781-201ENSMUST00000195232 649 ntBASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm8023-201ENSMUST00000195298 903 ntBASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm45379-201ENSMUST00000211772 549 ntBASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm8231-201ENSMUST00000221617 783 ntBASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC4.61□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm14365-201ENSMUST00000117535 587 ntBASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm22480-201ENSMUST00000122568 128 ntBASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm29668-201ENSMUST00000187802 315 ntBASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
Ccdc88aQ5SNZ0 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Ccdc88aQ5SNZ0 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Ccdc88aQ5SNZ0 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Ccdc88aQ5SNZ0 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Ccdc88aQ5SNZ0 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Ccdc88aQ5SNZ0 Mir673-201ENSMUST00000102361 91 ntBASIC4.59□□□□□ -1.67
Ccdc88aQ5SNZ0 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm14383-201ENSMUST00000121637 386 ntBASIC4.59□□□□□ -1.67
Ccdc88aQ5SNZ0 Mir1934-201ENSMUST00000158127 83 ntBASIC4.59□□□□□ -1.67
Ccdc88aQ5SNZ0 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm29563-201ENSMUST00000187249 496 ntBASIC4.59□□□□□ -1.67
Ccdc88aQ5SNZ0 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm44824-201ENSMUST00000207021 229 ntBASIC4.59□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm45498-201ENSMUST00000210346 283 ntBASIC4.59□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm8748-201ENSMUST00000211125 587 ntBASIC4.59□□□□□ -1.67
Ccdc88aQ5SNZ0 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.59□□□□□ -1.67
Ccdc88aQ5SNZ0 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.67
Ccdc88aQ5SNZ0 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Ccdc88aQ5SNZ0 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Ccdc88aQ5SNZ0 Gm42736-201ENSMUST00000200723 1353 ntBASIC4.58□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.58□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm25765-201ENSMUST00000104100 132 ntBASIC4.58□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm22590-201ENSMUST00000104247 128 ntBASIC4.58□□□□□ -1.68
Ccdc88aQ5SNZ0 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.58□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm25105-201ENSMUST00000122477 130 ntBASIC4.58□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC4.58□□□□□ -1.68
Ccdc88aQ5SNZ0 Gm24898-201ENSMUST00000158133 106 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms