Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm25965-201ENSMUST00000157170 93 ntBASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Gm25913-201ENSMUST00000157617 135 ntBASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Gm26320-201ENSMUST00000157742 306 ntBASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Gm4222-201ENSMUST00000165784 470 ntBASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Gm28639-201ENSMUST00000191519 481 ntBASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Gm44234-201ENSMUST00000204246 900 ntBASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Gm44607-201ENSMUST00000205611 1090 ntBASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Gm3690-201ENSMUST00000211341 262 ntBASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 CU024892.1-201ENSMUST00000224869 515 ntBASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Snord22-201ENSMUST00000083153 126 ntBASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trav5d-4Q5R1F6 Gm38104-201ENSMUST00000195121 1895 ntBASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Gm7452-202ENSMUST00000202891 3039 ntBASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Gm13664-201ENSMUST00000117304 345 ntBASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Gm6565-201ENSMUST00000121217 438 ntBASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Gm7618-201ENSMUST00000121643 171 ntBASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Gm11349-201ENSMUST00000122209 1116 ntBASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Gm15534-201ENSMUST00000137642 562 ntBASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Magea9-ps-201ENSMUST00000140655 732 ntBASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Gm23023-201ENSMUST00000158767 109 ntBASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Magea9-ps-202ENSMUST00000167328 899 ntBASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Gm23799-201ENSMUST00000175559 120 ntBASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Gm25019-201ENSMUST00000179732 110 ntBASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Gm27286-201ENSMUST00000184934 179 ntBASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Gm28614-201ENSMUST00000186483 458 ntBASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Gm44371-201ENSMUST00000204148 467 ntBASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Gm8035-201ENSMUST00000204625 687 ntBASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Gm19761-201ENSMUST00000205372 391 ntBASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Gm6361-201ENSMUST00000091031 435 ntBASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trav5d-4Q5R1F6 Gm17101-201ENSMUST00000169520 1588 ntBASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 Gm11350-201ENSMUST00000121436 870 ntBASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 Gm26187-201ENSMUST00000157693 101 ntBASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 Gm18522-201ENSMUST00000173947 650 ntBASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 Gm22398-201ENSMUST00000174941 125 ntBASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 Gm25731-201ENSMUST00000175167 125 ntBASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 Gm28859-201ENSMUST00000186650 616 ntBASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 Gm5368-201ENSMUST00000189012 589 ntBASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 Gm38270-201ENSMUST00000192721 407 ntBASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 Gm4644-201ENSMUST00000197587 400 ntBASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 Gm42814-201ENSMUST00000199370 460 ntBASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 AC131117.2-203ENSMUST00000225886 950 ntBASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 Snord21-201ENSMUST00000082519 94 ntBASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trav5d-4Q5R1F6 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms