Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm11719-201ENSMUST00000119399 351 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm7189-201ENSMUST00000119811 429 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm11746-201ENSMUST00000119843 821 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm12340-201ENSMUST00000121617 462 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm12087-201ENSMUST00000121878 258 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm24507-201ENSMUST00000157683 134 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm22339-201ENSMUST00000157718 62 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm24689-201ENSMUST00000157760 104 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm25433-201ENSMUST00000158283 286 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm3531-201ENSMUST00000162698 489 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm17159-201ENSMUST00000169043 482 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm17075-201ENSMUST00000171924 670 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Mir3110-201ENSMUST00000175053 80 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm22392-201ENSMUST00000177971 107 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm24417-201ENSMUST00000178123 79 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm24653-201ENSMUST00000178541 79 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm25934-201ENSMUST00000178642 79 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm27165-201ENSMUST00000183951 232 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Ighv1-27-201ENSMUST00000194473 340 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm44474-201ENSMUST00000196525 127 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm44392-201ENSMUST00000196758 115 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm42566-201ENSMUST00000197120 643 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Mir1892-201ENSMUST00000197752 80 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm43730-201ENSMUST00000199863 372 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm32308-201ENSMUST00000203053 280 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm18855-201ENSMUST00000206689 570 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm45857-201ENSMUST00000212207 356 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 AC156832.3-201ENSMUST00000215591 435 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm5185-201ENSMUST00000080271 619 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm36962-201ENSMUST00000192114 1761 ntBASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trim40Q3UWA4 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm42479-201ENSMUST00000198654 1356 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm24935-201ENSMUST00000103770 110 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm25096-201ENSMUST00000104043 129 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm15297-201ENSMUST00000117795 290 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm12186-201ENSMUST00000119050 945 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm13687-201ENSMUST00000119857 282 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm14383-201ENSMUST00000121637 386 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trim40Q3UWA4 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm14368-201ENSMUST00000145305 415 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm14710-201ENSMUST00000146082 1066 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm26187-201ENSMUST00000157693 101 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm25456-201ENSMUST00000157952 109 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm8214-201ENSMUST00000172123 351 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm27543-201ENSMUST00000183562 177 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm27427-201ENSMUST00000185134 193 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 122 ms