Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Mir6418-201ENSMUST00000185075 115 ntBASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm28974-201ENSMUST00000187893 231 ntBASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm37837-201ENSMUST00000191743 604 ntBASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm43344-201ENSMUST00000198723 1229 ntBASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm44817-201ENSMUST00000205416 453 ntBASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm7034-201ENSMUST00000218638 645 ntBASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Fus-202ENSMUST00000079045 2623 ntBASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Gm24544-201ENSMUST00000103862 110 ntBASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Gm26418-201ENSMUST00000104275 137 ntBASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Gm11448-201ENSMUST00000120427 450 ntBASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Gm15799-201ENSMUST00000120899 289 ntBASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Gm26148-201ENSMUST00000157430 68 ntBASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Gm23112-201ENSMUST00000158606 125 ntBASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Gm23179-201ENSMUST00000158693 304 ntBASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Gm21045-201ENSMUST00000183058 1020 ntBASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Gm27033-201ENSMUST00000183226 544 ntBASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Gm29552-201ENSMUST00000190548 660 ntBASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Gm37300-201ENSMUST00000193327 280 ntBASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Gm37791-201ENSMUST00000195081 286 ntBASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Gm17829-201ENSMUST00000219782 344 ntBASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 AC187103.4-202ENSMUST00000225091 230 ntBASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Upf3aQ3ULJ3 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Gm25833-201ENSMUST00000104137 133 ntBASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Gm10552-201ENSMUST00000113396 372 ntBASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Gm13386-201ENSMUST00000117677 124 ntBASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Gm15885-201ENSMUST00000122114 388 ntBASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Gm26352-201ENSMUST00000158223 125 ntBASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Gm16318-201ENSMUST00000162402 601 ntBASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Gm17060-201ENSMUST00000172394 824 ntBASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Gm22859-201ENSMUST00000174978 122 ntBASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Gm29408-201ENSMUST00000187536 216 ntBASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Gm17887-201ENSMUST00000200194 547 ntBASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Gm18306-201ENSMUST00000207338 569 ntBASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Mir202-201ENSMUST00000083568 72 ntBASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Gm7381-201ENSMUST00000098958 300 ntBASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.36□□□□□ -1.71
Upf3aQ3ULJ3 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm23133-201ENSMUST00000104255 135 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm6754-201ENSMUST00000117124 913 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms