Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.15□□□□□ -1.74
Trafd1Q3UDK1 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Trafd1Q3UDK1 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
Trafd1Q3UDK1 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Trafd1Q3UDK1 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Gm15426-201ENSMUST00000117823 556 ntBASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Gm7363-201ENSMUST00000119883 399 ntBASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Gm27315-201ENSMUST00000183977 154 ntBASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Gm19057-201ENSMUST00000194329 1197 ntBASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Gm8774-201ENSMUST00000203621 692 ntBASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Gm44371-201ENSMUST00000204148 467 ntBASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Gm45200-201ENSMUST00000207434 919 ntBASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Gm8679-201ENSMUST00000210651 1036 ntBASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 AC122901.2-201ENSMUST00000216926 285 ntBASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 AL645546.2-201ENSMUST00000224526 265 ntBASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 CU024892.1-201ENSMUST00000224869 515 ntBASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 AC159188.2-201ENSMUST00000224103 1301 ntBASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Trafd1Q3UDK1 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Gm42645-201ENSMUST00000201573 1627 ntBASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Gm43990-201ENSMUST00000203790 1691 ntBASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Gm11510-201ENSMUST00000120278 347 ntBASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Gm14725-201ENSMUST00000120324 828 ntBASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Gm13118-201ENSMUST00000120402 549 ntBASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Gm5963-201ENSMUST00000143451 236 ntBASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Gm16558-201ENSMUST00000163015 532 ntBASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Mir3473c-201ENSMUST00000175262 81 ntBASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Gm28011-201ENSMUST00000184097 175 ntBASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Gm27190-201ENSMUST00000184890 542 ntBASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Gm29479-201ENSMUST00000190352 455 ntBASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Gm17887-201ENSMUST00000200194 547 ntBASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Gm44234-201ENSMUST00000204246 900 ntBASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Gm44650-201ENSMUST00000206929 194 ntBASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Gm5339-201ENSMUST00000210551 1102 ntBASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 AC156803.1-201ENSMUST00000224407 820 ntBASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Trafd1Q3UDK1 Gm7709-201ENSMUST00000199391 1858 ntBASIC4.13□□□□□ -1.75
Trafd1Q3UDK1 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Trafd1Q3UDK1 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.13□□□□□ -1.75
Trafd1Q3UDK1 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Trafd1Q3UDK1 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms