Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm8681-201ENSMUST00000219115 618 ntBASIC4.41□□□□□ -1.7
Brf2Q3UAW9 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC4.41□□□□□ -1.7
Brf2Q3UAW9 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.41□□□□□ -1.7
Brf2Q3UAW9 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC4.41□□□□□ -1.7
Brf2Q3UAW9 Gm3333-202ENSMUST00000221763 1044 ntBASIC4.41□□□□□ -1.7
Brf2Q3UAW9 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC4.41□□□□□ -1.7
Brf2Q3UAW9 AC118006.2-201ENSMUST00000224167 962 ntBASIC4.41□□□□□ -1.7
Brf2Q3UAW9 AC137871.2-201ENSMUST00000226482 289 ntBASIC4.41□□□□□ -1.7
Brf2Q3UAW9 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Brf2Q3UAW9 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Brf2Q3UAW9 Gm25821-201ENSMUST00000093657 133 ntBASIC4.41□□□□□ -1.7
Brf2Q3UAW9 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Brf2Q3UAW9 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Brf2Q3UAW9 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.41□□□□□ -1.7
Brf2Q3UAW9 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Brf2Q3UAW9 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Brf2Q3UAW9 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Brf2Q3UAW9 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Brf2Q3UAW9 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Brf2Q3UAW9 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Brf2Q3UAW9 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Brf2Q3UAW9 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Brf2Q3UAW9 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Brf2Q3UAW9 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Brf2Q3UAW9 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Brf2Q3UAW9 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Brf2Q3UAW9 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Brf2Q3UAW9 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Brf2Q3UAW9 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Brf2Q3UAW9 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
Brf2Q3UAW9 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Brf2Q3UAW9 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Brf2Q3UAW9 Gm24124-201ENSMUST00000104103 132 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm12062-201ENSMUST00000117533 259 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm23777-201ENSMUST00000158994 259 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm3531-201ENSMUST00000162698 489 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm2966-201ENSMUST00000166052 481 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm6113-201ENSMUST00000180319 639 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Mir7235-201ENSMUST00000183796 56 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm27427-201ENSMUST00000185134 193 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm28061-201ENSMUST00000189085 807 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm28745-201ENSMUST00000190069 305 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm38234-201ENSMUST00000195204 421 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm43841-201ENSMUST00000199491 586 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm45200-201ENSMUST00000207434 919 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm6303-201ENSMUST00000210123 471 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm19709-201ENSMUST00000215403 482 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm31931-201ENSMUST00000219666 222 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Snord15b-201ENSMUST00000083032 145 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 AC190403.1-201ENSMUST00000224515 1325 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
Brf2Q3UAW9 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Brf2Q3UAW9 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
Brf2Q3UAW9 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Brf2Q3UAW9 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.39□□□□□ -1.71
Brf2Q3UAW9 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC4.39□□□□□ -1.71
Brf2Q3UAW9 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Brf2Q3UAW9 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Brf2Q3UAW9 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Brf2Q3UAW9 Gm7485-201ENSMUST00000119502 1109 ntBASIC4.39□□□□□ -1.71
Brf2Q3UAW9 Klra14-ps-201ENSMUST00000119532 802 ntBASIC4.39□□□□□ -1.71
Brf2Q3UAW9 Gm14577-201ENSMUST00000121134 256 ntBASIC4.39□□□□□ -1.71
Brf2Q3UAW9 Gm14979-201ENSMUST00000121561 1035 ntBASIC4.39□□□□□ -1.71
Brf2Q3UAW9 Gm11894-201ENSMUST00000121579 328 ntBASIC4.39□□□□□ -1.71
Brf2Q3UAW9 Gm14903-201ENSMUST00000122435 537 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms