Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC6.53□□□□□ -1.36
Col9a1Q05722 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col9a1Q05722 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col9a1Q05722 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col9a1Q05722 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col9a1Q05722 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Col9a1Q05722 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
Col9a1Q05722 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col9a1Q05722 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
Col9a1Q05722 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
Col9a1Q05722 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Col9a1Q05722 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC6.52□□□□□ -1.36
Col9a1Q05722 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col9a1Q05722 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Col9a1Q05722 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Col9a1Q05722 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Col9a1Q05722 Gm42436-201ENSMUST00000198804 3656 ntBASIC6.52□□□□□ -1.37
Col9a1Q05722 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col9a1Q05722 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col9a1Q05722 AC102847.2-201ENSMUST00000227799 2906 ntBASIC6.52□□□□□ -1.37
Col9a1Q05722 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col9a1Q05722 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col9a1Q05722 AC124561.2-201ENSMUST00000226657 1973 ntBASIC6.52□□□□□ -1.37
Col9a1Q05722 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col9a1Q05722 Gm24473-201ENSMUST00000104483 131 ntBASIC6.52□□□□□ -1.37
Col9a1Q05722 Gm12110-201ENSMUST00000121601 579 ntBASIC6.52□□□□□ -1.37
Col9a1Q05722 Gm22145-201ENSMUST00000157396 148 ntBASIC6.52□□□□□ -1.37
Col9a1Q05722 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC6.52□□□□□ -1.37
Col9a1Q05722 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col9a1Q05722 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC6.52□□□□□ -1.37
Col9a1Q05722 Gm18447-201ENSMUST00000187501 307 ntBASIC6.52□□□□□ -1.37
Col9a1Q05722 Gm30280-201ENSMUST00000192214 262 ntBASIC6.52□□□□□ -1.37
Col9a1Q05722 Gm37322-201ENSMUST00000193409 337 ntBASIC6.52□□□□□ -1.37
Col9a1Q05722 Ighv1-6-201ENSMUST00000193849 293 ntBASIC6.52□□□□□ -1.37
Col9a1Q05722 Gm42580-201ENSMUST00000197223 753 ntBASIC6.52□□□□□ -1.37
Col9a1Q05722 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC6.52□□□□□ -1.37
Col9a1Q05722 Gm20039-201ENSMUST00000210329 394 ntBASIC6.52□□□□□ -1.37
Col9a1Q05722 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC6.52□□□□□ -1.37
Col9a1Q05722 AC158633.1-201ENSMUST00000219892 649 ntBASIC6.52□□□□□ -1.37
Col9a1Q05722 AC156802.1-201ENSMUST00000223623 579 ntBASIC6.52□□□□□ -1.37
Col9a1Q05722 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Col9a1Q05722 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col9a1Q05722 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col9a1Q05722 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col9a1Q05722 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC6.52□□□□□ -1.37
Col9a1Q05722 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Col9a1Q05722 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col9a1Q05722 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Col9a1Q05722 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Col9a1Q05722 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col9a1Q05722 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm5362-201ENSMUST00000211968 3085 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 AC154461.6-201ENSMUST00000224815 2630 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm45644-201ENSMUST00000210255 2740 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Col9a1Q05722 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
Col9a1Q05722 AC129208.1-201ENSMUST00000227474 2906 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Col9a1Q05722 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Col9a1Q05722 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
Col9a1Q05722 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm24120-201ENSMUST00000103978 129 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm24125-201ENSMUST00000104105 137 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm14971-201ENSMUST00000117980 663 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm14566-201ENSMUST00000118915 321 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm15149-201ENSMUST00000119370 360 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm13396-201ENSMUST00000120617 271 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm11761-201ENSMUST00000121392 445 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm15237-201ENSMUST00000122104 469 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm24295-201ENSMUST00000158298 131 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Nron-204ENSMUST00000158971 370 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm24106-201ENSMUST00000175498 127 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Mir6992-201ENSMUST00000183342 109 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm8939-201ENSMUST00000192577 964 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm44817-201ENSMUST00000205416 453 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm44768-201ENSMUST00000205719 393 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm29884-201ENSMUST00000218403 453 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm23645-201ENSMUST00000083228 108 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms