Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Cux1P53564 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cux1P53564 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cux1P53564 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Cux1P53564 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Cux1P53564 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC5.96□□□□□ -1.46
Cux1P53564 Gm28941-201ENSMUST00000185536 1017 ntBASIC5.96□□□□□ -1.46
Cux1P53564 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cux1P53564 Gm29334-201ENSMUST00000190334 357 ntBASIC5.96□□□□□ -1.46
Cux1P53564 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC5.96□□□□□ -1.46
Cux1P53564 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
Cux1P53564 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC5.96□□□□□ -1.46
Cux1P53564 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cux1P53564 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Cux1P53564 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cux1P53564 Gm37999-201ENSMUST00000195178 1809 ntBASIC5.96□□□□□ -1.46
Cux1P53564 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Cux1P53564 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC5.96□□□□□ -1.46
Cux1P53564 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Cux1P53564 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cux1P53564 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cux1P53564 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
Cux1P53564 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC5.95□□□□□ -1.46
Cux1P53564 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cux1P53564 Gm18352-201ENSMUST00000189113 902 ntBASIC5.95□□□□□ -1.46
Cux1P53564 Gm43028-201ENSMUST00000202561 481 ntBASIC5.95□□□□□ -1.46
Cux1P53564 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Cux1P53564 AC153971.2-201ENSMUST00000214553 777 ntBASIC5.95□□□□□ -1.46
Cux1P53564 Gm23518-201ENSMUST00000082835 153 ntBASIC5.95□□□□□ -1.46
Cux1P53564 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cux1P53564 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.95□□□□□ -1.46
Cux1P53564 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cux1P53564 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cux1P53564 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.95□□□□□ -1.46
Cux1P53564 Gm5248-201ENSMUST00000186108 4046 ntBASIC5.95□□□□□ -1.46
Cux1P53564 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cux1P53564 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC5.95□□□□□ -1.46
Cux1P53564 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cux1P53564 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cux1P53564 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Cux1P53564 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Cux1P53564 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Cux1P53564 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Cux1P53564 Gm23540-201ENSMUST00000157543 164 ntBASIC5.94□□□□□ -1.46
Cux1P53564 Gm23666-201ENSMUST00000158053 116 ntBASIC5.94□□□□□ -1.46
Cux1P53564 Gm7497-201ENSMUST00000183064 1003 ntBASIC5.94□□□□□ -1.46
Cux1P53564 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC5.94□□□□□ -1.46
Cux1P53564 Gm6680-201ENSMUST00000192789 950 ntBASIC5.94□□□□□ -1.46
Cux1P53564 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC5.94□□□□□ -1.46
Cux1P53564 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.94□□□□□ -1.46
Cux1P53564 Gm19596-201ENSMUST00000203685 739 ntBASIC5.94□□□□□ -1.46
Cux1P53564 Gm45420-201ENSMUST00000211243 425 ntBASIC5.94□□□□□ -1.46
Cux1P53564 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC5.94□□□□□ -1.46
Cux1P53564 Gm9309-201ENSMUST00000223537 546 ntBASIC5.94□□□□□ -1.46
Cux1P53564 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cux1P53564 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cux1P53564 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cux1P53564 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.94□□□□□ -1.46
Cux1P53564 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.94□□□□□ -1.46
Cux1P53564 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cux1P53564 Gm26696-201ENSMUST00000181941 2848 ntBASIC5.94□□□□□ -1.46
Cux1P53564 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Cux1P53564 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cux1P53564 Gm44527-202ENSMUST00000204519 1314 ntBASIC5.94□□□□□ -1.46
Cux1P53564 Gm24067-201ENSMUST00000104514 85 ntBASIC5.94□□□□□ -1.46
Cux1P53564 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC5.94□□□□□ -1.46
Cux1P53564 Gm22219-201ENSMUST00000157562 319 ntBASIC5.94□□□□□ -1.46
Cux1P53564 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Cux1P53564 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Cux1P53564 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC5.94□□□□□ -1.46
Cux1P53564 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cux1P53564 AC133101.1-201ENSMUST00000226939 1199 ntBASIC5.94□□□□□ -1.46
Cux1P53564 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Cux1P53564 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Cux1P53564 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Cux1P53564 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Cux1P53564 Gm8473-201ENSMUST00000176697 1885 ntBASIC5.93□□□□□ -1.46
Cux1P53564 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.93□□□□□ -1.46
Cux1P53564 Gm43065-201ENSMUST00000198971 2092 ntBASIC5.93□□□□□ -1.46
Cux1P53564 Gm14973-201ENSMUST00000117248 255 ntBASIC5.93□□□□□ -1.46
Cux1P53564 Gm14975-201ENSMUST00000118741 664 ntBASIC5.93□□□□□ -1.46
Cux1P53564 Gm14861-201ENSMUST00000119451 455 ntBASIC5.93□□□□□ -1.46
Cux1P53564 Gm13677-201ENSMUST00000120739 595 ntBASIC5.93□□□□□ -1.46
Cux1P53564 Gm11385-201ENSMUST00000121513 570 ntBASIC5.93□□□□□ -1.46
Cux1P53564 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC5.93□□□□□ -1.46
Cux1P53564 Gm16260-201ENSMUST00000155141 304 ntBASIC5.93□□□□□ -1.46
Cux1P53564 Gm23121-201ENSMUST00000157653 173 ntBASIC5.93□□□□□ -1.46
Cux1P53564 Gm24550-201ENSMUST00000158648 279 ntBASIC5.93□□□□□ -1.46
Cux1P53564 Gm22859-201ENSMUST00000174978 122 ntBASIC5.93□□□□□ -1.46
Cux1P53564 Gm8641-201ENSMUST00000186995 826 ntBASIC5.93□□□□□ -1.46
Cux1P53564 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Cux1P53564 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Cux1P53564 Gm32381-201ENSMUST00000203192 476 ntBASIC5.93□□□□□ -1.46
Cux1P53564 AC154598.1-201ENSMUST00000227079 347 ntBASIC5.93□□□□□ -1.46
Cux1P53564 AC127371.1-201ENSMUST00000228516 312 ntBASIC5.93□□□□□ -1.46
Cux1P53564 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Cux1P53564 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Cux1P53564 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Cux1P53564 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cux1P53564 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms