Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm15772-201ENSMUST00000118533 438 ntBASIC5.31□□□□□ -1.56
Shmt1P50431 Gm15480-201ENSMUST00000120442 519 ntBASIC5.31□□□□□ -1.56
Shmt1P50431 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC5.31□□□□□ -1.56
Shmt1P50431 Gm5777-201ENSMUST00000177265 448 ntBASIC5.31□□□□□ -1.56
Shmt1P50431 Gm28343-201ENSMUST00000185386 112 ntBASIC5.31□□□□□ -1.56
Shmt1P50431 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.31□□□□□ -1.56
Shmt1P50431 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC5.31□□□□□ -1.56
Shmt1P50431 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Shmt1P50431 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC5.31□□□□□ -1.56
Shmt1P50431 Gm18698-201ENSMUST00000192327 668 ntBASIC5.31□□□□□ -1.56
Shmt1P50431 Gm18327-201ENSMUST00000202426 830 ntBASIC5.31□□□□□ -1.56
Shmt1P50431 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC5.31□□□□□ -1.56
Shmt1P50431 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Shmt1P50431 Gm44820-201ENSMUST00000207420 396 ntBASIC5.31□□□□□ -1.56
Shmt1P50431 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.31□□□□□ -1.56
Shmt1P50431 Gm8106-201ENSMUST00000213123 523 ntBASIC5.31□□□□□ -1.56
Shmt1P50431 AC165283.1-201ENSMUST00000223390 307 ntBASIC5.31□□□□□ -1.56
Shmt1P50431 AC107369.1-201ENSMUST00000227373 860 ntBASIC5.31□□□□□ -1.56
Shmt1P50431 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Shmt1P50431 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Shmt1P50431 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Shmt1P50431 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Shmt1P50431 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Shmt1P50431 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Shmt1P50431 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC5.31□□□□□ -1.56
Shmt1P50431 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.31□□□□□ -1.56
Shmt1P50431 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Shmt1P50431 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Shmt1P50431 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Shmt1P50431 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Shmt1P50431 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Shmt1P50431 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Shmt1P50431 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Shmt1P50431 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Shmt1P50431 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Shmt1P50431 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Shmt1P50431 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Shmt1P50431 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Shmt1P50431 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Shmt1P50431 Gm25595-201ENSMUST00000102273 97 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Gm24117-201ENSMUST00000103973 133 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Gm22272-201ENSMUST00000104039 134 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Gm12102-201ENSMUST00000118251 604 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Gm14506-201ENSMUST00000121165 536 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Gm22478-201ENSMUST00000122570 154 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Shmt1P50431 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Shmt1P50431 Gm23228-201ENSMUST00000157296 270 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Gm26153-201ENSMUST00000157433 127 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Shmt1P50431 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Shmt1P50431 Mir8118-201ENSMUST00000183962 129 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Gm27539-201ENSMUST00000184971 224 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Gm27492-201ENSMUST00000185194 187 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Gm28957-201ENSMUST00000190174 373 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC5.3□□□□□ -1.56
Shmt1P50431 Trbv22-201ENSMUST00000191697 291 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC5.3□□□□□ -1.56
Shmt1P50431 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC5.3□□□□□ -1.56
Shmt1P50431 Gm38221-201ENSMUST00000195146 365 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Gm31230-201ENSMUST00000199725 785 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Gm43224-201ENSMUST00000201567 898 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Gm8774-201ENSMUST00000203621 692 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Gm43919-201ENSMUST00000204303 364 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Gm18225-201ENSMUST00000216708 742 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Shmt1P50431 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC5.3□□□□□ -1.56
Shmt1P50431 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC5.3□□□□□ -1.56
Shmt1P50431 AC158392.2-201ENSMUST00000225402 969 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Shmt1P50431 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Shmt1P50431 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Shmt1P50431 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Shmt1P50431 Gm23423-201ENSMUST00000082782 106 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Shmt1P50431 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Shmt1P50431 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Shmt1P50431 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Shmt1P50431 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.3□□□□□ -1.56
Shmt1P50431 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.3□□□□□ -1.56
Shmt1P50431 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Shmt1P50431 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Shmt1P50431 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Shmt1P50431 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Shmt1P50431 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.3□□□□□ -1.56
Shmt1P50431 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Shmt1P50431 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Shmt1P50431 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Shmt1P50431 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Shmt1P50431 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Shmt1P50431 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.3□□□□□ -1.56
Shmt1P50431 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.29□□□□□ -1.56
Shmt1P50431 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Shmt1P50431 Gm45872-201ENSMUST00000209804 1584 ntBASIC5.29□□□□□ -1.56
Shmt1P50431 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms