Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Rfx1P48377 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Rfx1P48377 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Rfx1P48377 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC6.53□□□□□ -1.36
Rfx1P48377 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Rfx1P48377 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC6.53□□□□□ -1.36
Rfx1P48377 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx1P48377 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx1P48377 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx1P48377 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx1P48377 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx1P48377 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx1P48377 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx1P48377 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx1P48377 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
Rfx1P48377 Gm42729-201ENSMUST00000201770 2930 ntBASIC6.53□□□□□ -1.36
Rfx1P48377 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.36
Rfx1P48377 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Rfx1P48377 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.36
Rfx1P48377 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.36
Rfx1P48377 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rfx1P48377 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Rfx1P48377 Gm42661-201ENSMUST00000202364 1442 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 Gm42561-201ENSMUST00000202563 1442 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Rfx1P48377 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rfx1P48377 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Rfx1P48377 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Rfx1P48377 Gm22374-201ENSMUST00000104583 132 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 Gm14172-201ENSMUST00000118255 644 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 Gm14805-201ENSMUST00000120172 340 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 Gm14574-201ENSMUST00000120644 279 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 Gm15300-201ENSMUST00000122324 279 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 Gm22584-201ENSMUST00000177935 92 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 Gm26988-201ENSMUST00000183296 945 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 Gm27602-201ENSMUST00000183861 111 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 Gm29556-201ENSMUST00000187591 696 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Rfx1P48377 Gm29475-201ENSMUST00000190767 312 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC6.52□□□□□ -1.37
Rfx1P48377 Gm412-201ENSMUST00000193360 948 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 Gm45596-201ENSMUST00000209279 434 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 AC183268.2-201ENSMUST00000214513 446 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.52□□□□□ -1.37
Rfx1P48377 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rfx1P48377 AC153505.2-201ENSMUST00000217741 277 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 AC153532.3-201ENSMUST00000218660 3848 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 AC122924.2-201ENSMUST00000220799 298 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC6.52□□□□□ -1.37
Rfx1P48377 Gm6474-201ENSMUST00000223250 699 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Rfx1P48377 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rfx1P48377 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Rfx1P48377 Olfr881-201ENSMUST00000074611 948 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 Gm22293-201ENSMUST00000083314 109 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 Gm25126-201ENSMUST00000083343 102 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Rfx1P48377 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Rfx1P48377 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Rfx1P48377 Gm37064-201ENSMUST00000193851 2231 ntBASIC6.52□□□□□ -1.37
Rfx1P48377 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rfx1P48377 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Rfx1P48377 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Rfx1P48377 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Rfx1P48377 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Rfx1P48377 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Rfx1P48377 Gm6373-201ENSMUST00000121026 360 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 Gm14903-201ENSMUST00000122435 537 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 n-R5s201-201ENSMUST00000122622 116 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC6.51□□□□□ -1.37
Rfx1P48377 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC6.51□□□□□ -1.37
Rfx1P48377 Gm22492-201ENSMUST00000157192 297 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 Gm25520-201ENSMUST00000158389 118 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 Gm22428-201ENSMUST00000158554 132 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 Gm9071-201ENSMUST00000165915 474 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rfx1P48377 Gm25194-201ENSMUST00000177987 79 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Rfx1P48377 Gm27781-201ENSMUST00000185185 92 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 Gm28188-201ENSMUST00000190483 236 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 Gm37375-201ENSMUST00000193859 387 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 Gm37385-201ENSMUST00000195223 387 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 Gm7838-201ENSMUST00000203221 1189 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 Gm44768-201ENSMUST00000205719 393 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 Gm45081-201ENSMUST00000206281 572 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC6.51□□□□□ -1.37
Rfx1P48377 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC6.51□□□□□ -1.37
Rfx1P48377 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.51□□□□□ -1.37
Rfx1P48377 AC123067.1-201ENSMUST00000217711 462 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 AC132384.9-201ENSMUST00000218085 277 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC6.51□□□□□ -1.37
Rfx1P48377 Gm18592-201ENSMUST00000221529 276 ntBASIC6.51□□□□□ -1.37
Rfx1P48377 AC134917.2-201ENSMUST00000223354 124 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms