Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC3.78□□□□□ -1.8
P20040 Gm25525-201ENSMUST00000177701 107 ntBASIC3.78□□□□□ -1.8
P20040 Gm26178-201ENSMUST00000177706 107 ntBASIC3.78□□□□□ -1.8
P20040 Gm26465-201ENSMUST00000178517 107 ntBASIC3.78□□□□□ -1.8
P20040 Gm24317-201ENSMUST00000178536 107 ntBASIC3.78□□□□□ -1.8
P20040 Gm25021-201ENSMUST00000179184 107 ntBASIC3.78□□□□□ -1.8
P20040 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
P20040 Gm22995-201ENSMUST00000179670 107 ntBASIC3.78□□□□□ -1.8
P20040 Gm24424-201ENSMUST00000179714 107 ntBASIC3.78□□□□□ -1.8
P20040 Gm24389-201ENSMUST00000179962 107 ntBASIC3.78□□□□□ -1.8
P20040 Gm25672-201ENSMUST00000180111 107 ntBASIC3.78□□□□□ -1.8
P20040 Gm27883-201ENSMUST00000183941 102 ntBASIC3.78□□□□□ -1.8
P20040 Gm27414-201ENSMUST00000185033 381 ntBASIC3.78□□□□□ -1.8
P20040 Gm29163-201ENSMUST00000188029 107 ntBASIC3.78□□□□□ -1.8
P20040 Gm28625-201ENSMUST00000188309 205 ntBASIC3.78□□□□□ -1.8
P20040 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
P20040 Gm28191-201ENSMUST00000189112 211 ntBASIC3.78□□□□□ -1.8
P20040 Gm38008-201ENSMUST00000195333 518 ntBASIC3.78□□□□□ -1.8
P20040 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.78□□□□□ -1.8
P20040 Gm45078-201ENSMUST00000205343 546 ntBASIC3.78□□□□□ -1.8
P20040 Gm44681-201ENSMUST00000208447 842 ntBASIC3.78□□□□□ -1.8
P20040 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC3.78□□□□□ -1.8
P20040 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
P20040 Gm46190-201ENSMUST00000219650 427 ntBASIC3.78□□□□□ -1.8
P20040 AC122465.3-201ENSMUST00000221644 355 ntBASIC3.78□□□□□ -1.8
P20040 CT030166.1-201ENSMUST00000222654 357 ntBASIC3.78□□□□□ -1.8
P20040 AC154198.1-201ENSMUST00000222839 424 ntBASIC3.78□□□□□ -1.8
P20040 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC3.78□□□□□ -1.8
P20040 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC3.78□□□□□ -1.8
P20040 Gm26449-201ENSMUST00000082452 104 ntBASIC3.78□□□□□ -1.8
P20040 Gm23815-201ENSMUST00000083231 107 ntBASIC3.78□□□□□ -1.8
P20040 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
P20040 Gm23520-201ENSMUST00000093736 107 ntBASIC3.78□□□□□ -1.8
P20040 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
P20040 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
P20040 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.78□□□□□ -1.8
P20040 Gm36962-201ENSMUST00000192114 1761 ntBASIC3.78□□□□□ -1.8
P20040 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
P20040 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
P20040 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
P20040 Gm7709-201ENSMUST00000199391 1858 ntBASIC3.77□□□□□ -1.81
P20040 Gm7451-201ENSMUST00000208382 1392 ntBASIC3.77□□□□□ -1.81
P20040 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.77□□□□□ -1.81
P20040 Gm43662-201ENSMUST00000198310 2271 ntBASIC3.77□□□□□ -1.81
P20040 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
P20040 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
P20040 Gm25726-201ENSMUST00000104529 129 ntBASIC3.77□□□□□ -1.81
P20040 Gm13664-201ENSMUST00000117304 345 ntBASIC3.77□□□□□ -1.81
P20040 Gm12719-201ENSMUST00000118859 241 ntBASIC3.77□□□□□ -1.81
P20040 Gm12105-201ENSMUST00000120846 779 ntBASIC3.77□□□□□ -1.81
P20040 Gm12001-201ENSMUST00000121727 913 ntBASIC3.77□□□□□ -1.81
P20040 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
P20040 Gm23465-201ENSMUST00000157134 262 ntBASIC3.77□□□□□ -1.81
P20040 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC3.77□□□□□ -1.81
P20040 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
P20040 Gm18522-201ENSMUST00000173947 650 ntBASIC3.77□□□□□ -1.81
P20040 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
P20040 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC3.77□□□□□ -1.81
P20040 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
P20040 Gm28685-201ENSMUST00000187545 1101 ntBASIC3.77□□□□□ -1.81
P20040 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC3.77□□□□□ -1.81
P20040 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
P20040 Trbv28-201ENSMUST00000192804 264 ntBASIC3.77□□□□□ -1.81
P20040 Gm37193-201ENSMUST00000193087 513 ntBASIC3.77□□□□□ -1.81
P20040 Gm37088-201ENSMUST00000193887 406 ntBASIC3.77□□□□□ -1.81
P20040 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
P20040 Gm19237-201ENSMUST00000205036 1132 ntBASIC3.77□□□□□ -1.81
P20040 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC3.77□□□□□ -1.81
P20040 Gm17737-201ENSMUST00000210183 1147 ntBASIC3.77□□□□□ -1.81
P20040 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
P20040 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
P20040 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC3.77□□□□□ -1.81
P20040 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC3.77□□□□□ -1.81
P20040 Gm9616-201ENSMUST00000221154 781 ntBASIC3.77□□□□□ -1.81
P20040 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
P20040 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
P20040 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
P20040 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC3.77□□□□□ -1.81
P20040 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
P20040 Gm6361-201ENSMUST00000091031 435 ntBASIC3.77□□□□□ -1.81
P20040 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
P20040 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
P20040 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
P20040 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
P20040 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
P20040 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
P20040 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.76□□□□□ -1.81
P20040 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.76□□□□□ -1.81
P20040 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
P20040 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
P20040 Gm37527-201ENSMUST00000192406 3547 ntBASIC3.76□□□□□ -1.81
P20040 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
P20040 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
P20040 Gm24935-201ENSMUST00000103770 110 ntBASIC3.76□□□□□ -1.81
P20040 Gm14388-201ENSMUST00000118119 477 ntBASIC3.76□□□□□ -1.81
P20040 Gm14750-201ENSMUST00000118262 516 ntBASIC3.76□□□□□ -1.81
P20040 Gm15385-201ENSMUST00000118725 667 ntBASIC3.76□□□□□ -1.81
P20040 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.76□□□□□ -1.81
P20040 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC3.76□□□□□ -1.81
P20040 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms