Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC6.1□□□□□ -1.43
RaraP11416 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC6.1□□□□□ -1.43
RaraP11416 Gm46996-201ENSMUST00000220924 408 ntBASIC6.1□□□□□ -1.43
RaraP11416 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC6.1□□□□□ -1.43
RaraP11416 Gm6068-201ENSMUST00000222270 387 ntBASIC6.1□□□□□ -1.43
RaraP11416 CT030184.1-201ENSMUST00000222393 416 ntBASIC6.1□□□□□ -1.43
RaraP11416 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC6.1□□□□□ -1.43
RaraP11416 CT010453.2-201ENSMUST00000227005 483 ntBASIC6.1□□□□□ -1.43
RaraP11416 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RaraP11416 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RaraP11416 Gm25699-201ENSMUST00000082896 167 ntBASIC6.1□□□□□ -1.43
RaraP11416 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC6.1□□□□□ -1.43
RaraP11416 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.1□□□□□ -1.43
RaraP11416 Gm4541-201ENSMUST00000208901 1848 ntBASIC6.1□□□□□ -1.43
RaraP11416 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
RaraP11416 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RaraP11416 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RaraP11416 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RaraP11416 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RaraP11416 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RaraP11416 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.09□□□□□ -1.43
RaraP11416 Gm7919-201ENSMUST00000202043 1389 ntBASIC6.09□□□□□ -1.43
RaraP11416 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
RaraP11416 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RaraP11416 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
RaraP11416 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
RaraP11416 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RaraP11416 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RaraP11416 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RaraP11416 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RaraP11416 n-R5s82-201ENSMUST00000104213 109 ntBASIC6.09□□□□□ -1.43
RaraP11416 Gm16179-201ENSMUST00000120685 373 ntBASIC6.09□□□□□ -1.43
RaraP11416 Gm16016-201ENSMUST00000120831 550 ntBASIC6.09□□□□□ -1.43
RaraP11416 Gm14695-201ENSMUST00000121721 282 ntBASIC6.09□□□□□ -1.43
RaraP11416 Gm25784-201ENSMUST00000122524 81 ntBASIC6.09□□□□□ -1.43
RaraP11416 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC6.09□□□□□ -1.43
RaraP11416 Gm2020-201ENSMUST00000145242 579 ntBASIC6.09□□□□□ -1.43
RaraP11416 Gm4487-201ENSMUST00000150617 442 ntBASIC6.09□□□□□ -1.43
RaraP11416 Gm24692-201ENSMUST00000157761 146 ntBASIC6.09□□□□□ -1.43
RaraP11416 Gm25227-201ENSMUST00000158204 112 ntBASIC6.09□□□□□ -1.43
RaraP11416 Gm25902-201ENSMUST00000158493 318 ntBASIC6.09□□□□□ -1.43
RaraP11416 Gm17366-201ENSMUST00000167629 187 ntBASIC6.09□□□□□ -1.43
RaraP11416 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC6.09□□□□□ -1.43
RaraP11416 Gm26426-201ENSMUST00000177866 123 ntBASIC6.09□□□□□ -1.43
RaraP11416 Gm26060-201ENSMUST00000180094 123 ntBASIC6.09□□□□□ -1.43
RaraP11416 Gm28299-201ENSMUST00000189908 339 ntBASIC6.09□□□□□ -1.43
RaraP11416 Gm28069-201ENSMUST00000189926 214 ntBASIC6.09□□□□□ -1.43
RaraP11416 Gm37743-201ENSMUST00000194645 376 ntBASIC6.09□□□□□ -1.43
RaraP11416 Gm43392-201ENSMUST00000196560 434 ntBASIC6.09□□□□□ -1.43
RaraP11416 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC6.09□□□□□ -1.43
RaraP11416 Gm43825-201ENSMUST00000199650 734 ntBASIC6.09□□□□□ -1.43
RaraP11416 Gm45700-201ENSMUST00000205866 347 ntBASIC6.09□□□□□ -1.43
RaraP11416 Gm5322-201ENSMUST00000206142 699 ntBASIC6.09□□□□□ -1.43
RaraP11416 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC6.09□□□□□ -1.43
RaraP11416 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.09□□□□□ -1.43
RaraP11416 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC6.09□□□□□ -1.43
RaraP11416 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC6.09□□□□□ -1.43
RaraP11416 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RaraP11416 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RaraP11416 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RaraP11416 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RaraP11416 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RaraP11416 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RaraP11416 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
RaraP11416 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RaraP11416 AC164102.1-201ENSMUST00000220524 1553 ntBASIC6.09□□□□□ -1.43
RaraP11416 AC132852.1-201ENSMUST00000214683 2324 ntBASIC6.09□□□□□ -1.43
RaraP11416 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
RaraP11416 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
RaraP11416 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RaraP11416 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.44
RaraP11416 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
RaraP11416 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
RaraP11416 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RaraP11416 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC6.08□□□□□ -1.44
RaraP11416 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
RaraP11416 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RaraP11416 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RaraP11416 Mir450-2-201ENSMUST00000102444 69 ntBASIC6.08□□□□□ -1.44
RaraP11416 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RaraP11416 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RaraP11416 Gm11699-201ENSMUST00000119016 401 ntBASIC6.08□□□□□ -1.44
RaraP11416 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC6.08□□□□□ -1.44
RaraP11416 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC6.08□□□□□ -1.44
RaraP11416 Gm22960-201ENSMUST00000122517 104 ntBASIC6.08□□□□□ -1.44
RaraP11416 Gm25291-201ENSMUST00000122795 144 ntBASIC6.08□□□□□ -1.44
RaraP11416 Gm25387-201ENSMUST00000157813 132 ntBASIC6.08□□□□□ -1.44
RaraP11416 Gm25439-201ENSMUST00000158280 131 ntBASIC6.08□□□□□ -1.44
RaraP11416 Gm22765-201ENSMUST00000158371 128 ntBASIC6.08□□□□□ -1.44
RaraP11416 Gm15838-201ENSMUST00000161575 180 ntBASIC6.08□□□□□ -1.44
RaraP11416 Gm3030-201ENSMUST00000163410 516 ntBASIC6.08□□□□□ -1.44
RaraP11416 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RaraP11416 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC6.08□□□□□ -1.44
RaraP11416 Gm25243-201ENSMUST00000174912 207 ntBASIC6.08□□□□□ -1.44
RaraP11416 Gm23047-201ENSMUST00000177661 94 ntBASIC6.08□□□□□ -1.44
RaraP11416 Gm24303-201ENSMUST00000178237 126 ntBASIC6.08□□□□□ -1.44
RaraP11416 Gm23141-201ENSMUST00000178682 94 ntBASIC6.08□□□□□ -1.44
RaraP11416 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RaraP11416 Gm8532-201ENSMUST00000179174 461 ntBASIC6.08□□□□□ -1.44
RaraP11416 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms