Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Gm43178-201ENSMUST00000197257 1386 ntBASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Chmp6P0C0A3 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Gm4910-201ENSMUST00000119605 366 ntBASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Gm13118-201ENSMUST00000120402 549 ntBASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Gm12103-201ENSMUST00000121892 362 ntBASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Gm25908-201ENSMUST00000157624 98 ntBASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Gm22211-201ENSMUST00000158097 156 ntBASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Gm26036-201ENSMUST00000158149 144 ntBASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Mir5134-201ENSMUST00000175529 78 ntBASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Gm5974-201ENSMUST00000181607 986 ntBASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Gm9245-201ENSMUST00000200528 983 ntBASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC4.47□□□□□ -1.69
Chmp6P0C0A3 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Gm7588-201ENSMUST00000216866 571 ntBASIC4.47□□□□□ -1.69
Chmp6P0C0A3 CT009765.2-201ENSMUST00000221331 392 ntBASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Gm22971-201ENSMUST00000083305 97 ntBASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Chmp6P0C0A3 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.47□□□□□ -1.69
Chmp6P0C0A3 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.47□□□□□ -1.69
Chmp6P0C0A3 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Chmp6P0C0A3 Gm44742-201ENSMUST00000207190 1412 ntBASIC4.46□□□□□ -1.69
Chmp6P0C0A3 Gm44224-201ENSMUST00000204131 1463 ntBASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Gm23481-201ENSMUST00000104173 131 ntBASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Gm11432-201ENSMUST00000117334 231 ntBASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Clec2f-201ENSMUST00000121051 374 ntBASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Gm15141-201ENSMUST00000121860 729 ntBASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Gm11506-201ENSMUST00000122414 470 ntBASIC4.46□□□□□ -1.7
Chmp6P0C0A3 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Mir7028-201ENSMUST00000185016 64 ntBASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Gm28923-201ENSMUST00000187755 322 ntBASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Gm17954-201ENSMUST00000195893 607 ntBASIC4.46□□□□□ -1.7
Chmp6P0C0A3 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Gm8132-201ENSMUST00000204938 640 ntBASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Gm44946-201ENSMUST00000208425 572 ntBASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.46□□□□□ -1.7
Chmp6P0C0A3 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.46□□□□□ -1.7
Chmp6P0C0A3 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
Chmp6P0C0A3 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Gm42455-201ENSMUST00000199761 2736 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
Chmp6P0C0A3 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Gm22493-201ENSMUST00000104494 132 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Gm23226-201ENSMUST00000116927 103 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Gm8666-201ENSMUST00000117517 292 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Gm12340-201ENSMUST00000121617 462 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Gm25177-201ENSMUST00000122634 117 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Gm16250-201ENSMUST00000148974 256 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Gm25553-201ENSMUST00000158076 79 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Gm22135-201ENSMUST00000158752 108 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Mir5106-201ENSMUST00000174936 73 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms