Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Hoxd3P09027 Gm25361-201ENSMUST00000179358 76 ntBASIC5.07□□□□□ -1.6
Hoxd3P09027 Mir7046-201ENSMUST00000183435 66 ntBASIC5.07□□□□□ -1.6
Hoxd3P09027 Gm28399-201ENSMUST00000186221 318 ntBASIC5.07□□□□□ -1.6
Hoxd3P09027 Gm28572-201ENSMUST00000187444 318 ntBASIC5.07□□□□□ -1.6
Hoxd3P09027 Gm29365-201ENSMUST00000189461 699 ntBASIC5.07□□□□□ -1.6
Hoxd3P09027 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC5.07□□□□□ -1.6
Hoxd3P09027 Gm38040-201ENSMUST00000193505 225 ntBASIC5.07□□□□□ -1.6
Hoxd3P09027 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.07□□□□□ -1.6
Hoxd3P09027 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC5.07□□□□□ -1.6
Hoxd3P09027 Gm45207-201ENSMUST00000207469 145 ntBASIC5.07□□□□□ -1.6
Hoxd3P09027 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Hoxd3P09027 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.07□□□□□ -1.6
Hoxd3P09027 Gm45473-201ENSMUST00000211452 616 ntBASIC5.07□□□□□ -1.6
Hoxd3P09027 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC5.07□□□□□ -1.6
Hoxd3P09027 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.07□□□□□ -1.6
Hoxd3P09027 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC5.07□□□□□ -1.6
Hoxd3P09027 AC160031.2-201ENSMUST00000218242 274 ntBASIC5.07□□□□□ -1.6
Hoxd3P09027 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Hoxd3P09027 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC5.07□□□□□ -1.6
Hoxd3P09027 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.07□□□□□ -1.6
Hoxd3P09027 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.07□□□□□ -1.6
Hoxd3P09027 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.07□□□□□ -1.6
Hoxd3P09027 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Hoxd3P09027 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Hoxd3P09027 n-R5s97-201ENSMUST00000082585 113 ntBASIC5.07□□□□□ -1.6
Hoxd3P09027 Gm22974-201ENSMUST00000083301 103 ntBASIC5.07□□□□□ -1.6
Hoxd3P09027 Mir412-201ENSMUST00000083636 80 ntBASIC5.07□□□□□ -1.6
Hoxd3P09027 Gm22577-201ENSMUST00000083731 109 ntBASIC5.07□□□□□ -1.6
Hoxd3P09027 Gm24032-201ENSMUST00000083932 159 ntBASIC5.07□□□□□ -1.6
Hoxd3P09027 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.07□□□□□ -1.6
Hoxd3P09027 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Hoxd3P09027 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Hoxd3P09027 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.07□□□□□ -1.6
Hoxd3P09027 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.07□□□□□ -1.6
Hoxd3P09027 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Hoxd3P09027 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Hoxd3P09027 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC5.07□□□□□ -1.6
Hoxd3P09027 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Hoxd3P09027 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hoxd3P09027 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hoxd3P09027 Gm44925-201ENSMUST00000208879 2110 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hoxd3P09027 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hoxd3P09027 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Hoxd3P09027 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Hoxd3P09027 Gm37970-201ENSMUST00000193865 1732 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hoxd3P09027 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 AU020206-202ENSMUST00000206358 3009 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hoxd3P09027 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Hoxd3P09027 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Hoxd3P09027 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hoxd3P09027 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Hoxd3P09027 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Hoxd3P09027 Gm43876-201ENSMUST00000203831 3229 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hoxd3P09027 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hoxd3P09027 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Hoxd3P09027 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.06□□□□□ -1.6
Hoxd3P09027 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC5.06□□□□□ -1.6
Hoxd3P09027 Gm22820-201ENSMUST00000157205 329 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Gm26348-201ENSMUST00000157528 240 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Gm24784-201ENSMUST00000157640 62 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Gm5260-201ENSMUST00000186157 949 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC5.06□□□□□ -1.6
Hoxd3P09027 Gm38150-201ENSMUST00000192996 452 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Gm38237-201ENSMUST00000193366 376 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Gm38098-201ENSMUST00000194115 241 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Trbv9-201ENSMUST00000194494 290 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Gm42566-201ENSMUST00000197120 643 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Gm42925-201ENSMUST00000197359 285 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hoxd3P09027 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC5.06□□□□□ -1.6
Hoxd3P09027 Gm45200-201ENSMUST00000207434 919 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 AC125374.2-201ENSMUST00000214278 162 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 AC124346.1-201ENSMUST00000218539 364 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.06□□□□□ -1.6
Hoxd3P09027 AC154861.1-201ENSMUST00000223767 800 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 AC139750.2-201ENSMUST00000224424 386 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Olfr467-201ENSMUST00000084756 927 ntBASIC5.06□□□□□ -1.6
Hoxd3P09027 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Hoxd3P09027 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hoxd3P09027 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hoxd3P09027 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 107.4 ms