Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC4.94□□□□□ -1.62
Col3a1P08121 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col3a1P08121 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Col3a1P08121 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Gm42942-201ENSMUST00000196086 1328 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col3a1P08121 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Col3a1P08121 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.94□□□□□ -1.62
Col3a1P08121 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col3a1P08121 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Col3a1P08121 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col3a1P08121 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col3a1P08121 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col3a1P08121 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC4.94□□□□□ -1.62
Col3a1P08121 Gm12327-201ENSMUST00000121729 1168 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Gm16566-201ENSMUST00000160387 910 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Gm20689-201ENSMUST00000176033 279 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC4.94□□□□□ -1.62
Col3a1P08121 Gm37337-201ENSMUST00000192601 993 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Gm37791-201ENSMUST00000195081 286 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC4.94□□□□□ -1.62
Col3a1P08121 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC4.94□□□□□ -1.62
Col3a1P08121 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col3a1P08121 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC4.94□□□□□ -1.62
Col3a1P08121 Vmn1r89-206ENSMUST00000227319 985 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Col3a1P08121 Gm5471-201ENSMUST00000072732 337 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Gm10145-201ENSMUST00000077776 462 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col3a1P08121 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Col3a1P08121 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col3a1P08121 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Col3a1P08121 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col3a1P08121 CT009733.2-202ENSMUST00000224171 4748 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Col3a1P08121 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col3a1P08121 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col3a1P08121 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC4.93□□□□□ -1.62
Col3a1P08121 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col3a1P08121 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col3a1P08121 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col3a1P08121 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC4.93□□□□□ -1.62
Col3a1P08121 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC4.93□□□□□ -1.62
Col3a1P08121 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Col3a1P08121 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col3a1P08121 Gm15933-201ENSMUST00000117215 616 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Gm12458-201ENSMUST00000119387 495 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Gm11719-201ENSMUST00000119399 351 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Defa-ps5-201ENSMUST00000121541 279 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Gm14713-201ENSMUST00000122362 686 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Gm3160-201ENSMUST00000128343 607 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Gm16260-201ENSMUST00000155141 304 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col3a1P08121 Gm23617-201ENSMUST00000175410 95 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.93□□□□□ -1.62
Col3a1P08121 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col3a1P08121 Gm29161-201ENSMUST00000188250 699 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Gm21617-201ENSMUST00000188297 691 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Gm28190-201ENSMUST00000189766 722 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Gm28437-201ENSMUST00000190277 783 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Gm28396-201ENSMUST00000190309 379 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Gm37164-201ENSMUST00000192809 637 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Igkv8-31-201ENSMUST00000200040 372 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Gm44585-201ENSMUST00000207150 607 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.93□□□□□ -1.62
Col3a1P08121 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Gm45796-201ENSMUST00000212483 114 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col3a1P08121 AC159476.2-201ENSMUST00000216221 418 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 AC120394.1-201ENSMUST00000217153 351 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col3a1P08121 AC153801.1-201ENSMUST00000217904 947 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Gm17829-201ENSMUST00000219782 344 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 AC164629.1-201ENSMUST00000220250 1113 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Gm5655-201ENSMUST00000221078 901 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC4.93□□□□□ -1.62
Col3a1P08121 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col3a1P08121 Olfr844-201ENSMUST00000054106 930 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Col3a1P08121 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Col3a1P08121 Gm7099-201ENSMUST00000080066 554 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Gm24919-201ENSMUST00000083020 106 ntBASIC4.93□□□□□ -1.62
Col3a1P08121 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col3a1P08121 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Col3a1P08121 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col3a1P08121 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col3a1P08121 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Col3a1P08121 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col3a1P08121 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col3a1P08121 Gm44897-201ENSMUST00000206187 1341 ntBASIC4.92□□□□□ -1.62
Col3a1P08121 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Col3a1P08121 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms