Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Smarce1O54941 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Smarce1O54941 Gm45804-201ENSMUST00000212137 3435 ntBASIC5.04□□□□□ -1.6
Smarce1O54941 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
Smarce1O54941 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Smarce1O54941 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Smarce1O54941 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.04□□□□□ -1.6
Smarce1O54941 Gm23608-201ENSMUST00000104545 128 ntBASIC5.04□□□□□ -1.6
Smarce1O54941 Gm14388-201ENSMUST00000118119 477 ntBASIC5.04□□□□□ -1.6
Smarce1O54941 Gm16383-201ENSMUST00000118122 232 ntBASIC5.04□□□□□ -1.6
Smarce1O54941 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC5.04□□□□□ -1.6
Smarce1O54941 Gm12587-201ENSMUST00000120180 427 ntBASIC5.04□□□□□ -1.6
Smarce1O54941 Gm13080-201ENSMUST00000120556 420 ntBASIC5.04□□□□□ -1.6
Smarce1O54941 Gm3835-201ENSMUST00000120752 403 ntBASIC5.04□□□□□ -1.6
Smarce1O54941 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Smarce1O54941 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Smarce1O54941 Gm26310-201ENSMUST00000157766 117 ntBASIC5.04□□□□□ -1.6
Smarce1O54941 Gm25264-201ENSMUST00000158519 117 ntBASIC5.04□□□□□ -1.6
Smarce1O54941 Gm17109-201ENSMUST00000163985 358 ntBASIC5.04□□□□□ -1.6
Smarce1O54941 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Smarce1O54941 Mir6911-201ENSMUST00000184241 69 ntBASIC5.04□□□□□ -1.6
Smarce1O54941 Gm28503-201ENSMUST00000185966 147 ntBASIC5.04□□□□□ -1.6
Smarce1O54941 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Smarce1O54941 Gm29610-201ENSMUST00000187749 453 ntBASIC5.04□□□□□ -1.6
Smarce1O54941 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Smarce1O54941 Gm17917-201ENSMUST00000218561 953 ntBASIC5.04□□□□□ -1.6
Smarce1O54941 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Smarce1O54941 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Smarce1O54941 Gm24144-201ENSMUST00000082632 111 ntBASIC5.04□□□□□ -1.6
Smarce1O54941 Gm22575-201ENSMUST00000082981 110 ntBASIC5.04□□□□□ -1.6
Smarce1O54941 Gm22444-201ENSMUST00000093693 108 ntBASIC5.04□□□□□ -1.6
Smarce1O54941 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Smarce1O54941 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Smarce1O54941 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Smarce1O54941 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Smarce1O54941 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Smarce1O54941 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Smarce1O54941 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Smarce1O54941 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Smarce1O54941 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC5.03□□□□□ -1.6
Smarce1O54941 Gm45131-201ENSMUST00000208051 2582 ntBASIC5.03□□□□□ -1.6
Smarce1O54941 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Smarce1O54941 Gm23226-201ENSMUST00000116927 103 ntBASIC5.03□□□□□ -1.6
Smarce1O54941 Gm12520-201ENSMUST00000117493 316 ntBASIC5.03□□□□□ -1.6
Smarce1O54941 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Smarce1O54941 Gm12788-201ENSMUST00000119090 308 ntBASIC5.03□□□□□ -1.6
Smarce1O54941 Gm14067-201ENSMUST00000119340 314 ntBASIC5.03□□□□□ -1.6
Smarce1O54941 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC5.03□□□□□ -1.6
Smarce1O54941 Gm26254-201ENSMUST00000122491 118 ntBASIC5.03□□□□□ -1.6
Smarce1O54941 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC5.03□□□□□ -1.6
Smarce1O54941 Gm17075-201ENSMUST00000171924 670 ntBASIC5.03□□□□□ -1.6
Smarce1O54941 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC5.03□□□□□ -1.6
Smarce1O54941 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.03□□□□□ -1.6
Smarce1O54941 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC5.03□□□□□ -1.6
Smarce1O54941 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Smarce1O54941 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC5.03□□□□□ -1.6
Smarce1O54941 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC5.03□□□□□ -1.6
Smarce1O54941 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC5.03□□□□□ -1.6
Smarce1O54941 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC5.03□□□□□ -1.6
Smarce1O54941 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC5.03□□□□□ -1.6
Smarce1O54941 Gm18611-201ENSMUST00000200334 1118 ntBASIC5.03□□□□□ -1.6
Smarce1O54941 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC5.03□□□□□ -1.6
Smarce1O54941 Gm36371-201ENSMUST00000209043 1103 ntBASIC5.03□□□□□ -1.6
Smarce1O54941 Gm6303-201ENSMUST00000210123 471 ntBASIC5.03□□□□□ -1.6
Smarce1O54941 Gm45651-201ENSMUST00000210857 335 ntBASIC5.03□□□□□ -1.6
Smarce1O54941 AC153516.1-201ENSMUST00000217955 779 ntBASIC5.03□□□□□ -1.6
Smarce1O54941 Gm17915-201ENSMUST00000222077 548 ntBASIC5.03□□□□□ -1.6
Smarce1O54941 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.03□□□□□ -1.6
Smarce1O54941 AC154738.2-201ENSMUST00000227403 1110 ntBASIC5.03□□□□□ -1.6
Smarce1O54941 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Smarce1O54941 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Smarce1O54941 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Smarce1O54941 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Smarce1O54941 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Smarce1O54941 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Smarce1O54941 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Smarce1O54941 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Smarce1O54941 AC152162.1-201ENSMUST00000225910 2917 ntBASIC5.03□□□□□ -1.6
Smarce1O54941 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Smarce1O54941 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Smarce1O54941 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Smarce1O54941 Gm44847-201ENSMUST00000207104 1991 ntBASIC5.02□□□□□ -1.61
Smarce1O54941 Gm24117-201ENSMUST00000103973 133 ntBASIC5.02□□□□□ -1.61
Smarce1O54941 Gm15752-201ENSMUST00000117427 394 ntBASIC5.02□□□□□ -1.61
Smarce1O54941 Gm14512-201ENSMUST00000117924 230 ntBASIC5.02□□□□□ -1.61
Smarce1O54941 Gm12880-201ENSMUST00000120652 494 ntBASIC5.02□□□□□ -1.61
Smarce1O54941 Gm13745-201ENSMUST00000121994 527 ntBASIC5.02□□□□□ -1.61
Smarce1O54941 Gm10444-201ENSMUST00000126708 148 ntBASIC5.02□□□□□ -1.61
Smarce1O54941 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC5.02□□□□□ -1.61
Smarce1O54941 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Smarce1O54941 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC5.02□□□□□ -1.61
Smarce1O54941 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC5.02□□□□□ -1.61
Smarce1O54941 Gm19503-201ENSMUST00000187109 241 ntBASIC5.02□□□□□ -1.61
Smarce1O54941 Gm37300-201ENSMUST00000193327 280 ntBASIC5.02□□□□□ -1.61
Smarce1O54941 Gm44300-201ENSMUST00000196792 121 ntBASIC5.02□□□□□ -1.61
Smarce1O54941 Gm43116-201ENSMUST00000199789 195 ntBASIC5.02□□□□□ -1.61
Smarce1O54941 Gm31520-201ENSMUST00000203048 733 ntBASIC5.02□□□□□ -1.61
Smarce1O54941 Gm44023-201ENSMUST00000203710 469 ntBASIC5.02□□□□□ -1.61
Smarce1O54941 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Smarce1O54941 Gm17987-201ENSMUST00000206902 603 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 112.9 ms