Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm18861-201ENSMUST00000202509 1186 ntBASIC3.24□□□□□ -1.89
Hmgb3O54879 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.24□□□□□ -1.89
Hmgb3O54879 Gm44972-201ENSMUST00000206419 406 ntBASIC3.24□□□□□ -1.89
Hmgb3O54879 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC3.24□□□□□ -1.89
Hmgb3O54879 AC156559.1-201ENSMUST00000224158 222 ntBASIC3.24□□□□□ -1.89
Hmgb3O54879 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.24□□□□□ -1.89
Hmgb3O54879 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Hmgb3O54879 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
Hmgb3O54879 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Hmgb3O54879 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Hmgb3O54879 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Hmgb3O54879 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm37407-201ENSMUST00000194793 1316 ntBASIC3.23□□□□□ -1.89
Hmgb3O54879 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.23□□□□□ -1.89
Hmgb3O54879 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Hmgb3O54879 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Hmgb3O54879 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC3.23□□□□□ -1.89
Hmgb3O54879 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm15148-201ENSMUST00000117602 156 ntBASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm5943-201ENSMUST00000119458 459 ntBASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm13737-201ENSMUST00000119793 232 ntBASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC3.23□□□□□ -1.89
Hmgb3O54879 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Hmgb3O54879 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm25383-201ENSMUST00000157810 144 ntBASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm22314-201ENSMUST00000158007 281 ntBASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm17155-201ENSMUST00000165969 473 ntBASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm8224-201ENSMUST00000166178 497 ntBASIC3.23□□□□□ -1.89
Hmgb3O54879 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Hmgb3O54879 Mir3110-201ENSMUST00000175053 80 ntBASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm27468-201ENSMUST00000183577 106 ntBASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm27976-201ENSMUST00000183635 162 ntBASIC3.23□□□□□ -1.89
Hmgb3O54879 Mir1957b-201ENSMUST00000184608 123 ntBASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm29588-201ENSMUST00000185738 298 ntBASIC3.23□□□□□ -1.89
Hmgb3O54879 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm28061-201ENSMUST00000189085 807 ntBASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm43710-201ENSMUST00000199583 452 ntBASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm18320-201ENSMUST00000211304 595 ntBASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm29785-201ENSMUST00000217033 383 ntBASIC3.23□□□□□ -1.89
Hmgb3O54879 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Hmgb3O54879 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.23□□□□□ -1.89
Hmgb3O54879 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm6049-201ENSMUST00000222369 458 ntBASIC3.23□□□□□ -1.89
Hmgb3O54879 AC154738.5-201ENSMUST00000227397 310 ntBASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Hmgb3O54879 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Hmgb3O54879 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.23□□□□□ -1.89
Hmgb3O54879 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Hmgb3O54879 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Hmgb3O54879 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Hmgb3O54879 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Hmgb3O54879 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Hmgb3O54879 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Hmgb3O54879 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Hmgb3O54879 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Hmgb3O54879 Gm18180-201ENSMUST00000187562 1484 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm17101-201ENSMUST00000169520 1588 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Hmgb3O54879 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC3.22□□□□□ -1.89
Hmgb3O54879 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3.22□□□□□ -1.89
Hmgb3O54879 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm12520-201ENSMUST00000117493 316 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm14365-201ENSMUST00000117535 587 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm13314-201ENSMUST00000118742 335 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm9078-201ENSMUST00000119126 617 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm14977-201ENSMUST00000121626 812 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm13745-201ENSMUST00000121994 527 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm22536-201ENSMUST00000158171 134 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm25264-201ENSMUST00000158519 117 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm22177-201ENSMUST00000175002 158 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Hmgb3O54879 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Hmgb3O54879 Mir7674-201ENSMUST00000184964 63 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Igkv2-107-201ENSMUST00000196000 313 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm8458-201ENSMUST00000196658 819 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Hmgb3O54879 Igkv4-56-201ENSMUST00000198436 349 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm4859-201ENSMUST00000199625 787 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm44773-201ENSMUST00000207374 557 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm19096-201ENSMUST00000209705 766 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm5457-201ENSMUST00000022260 333 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Hmgb3O54879 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Hmgb3O54879 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms