Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm43369-201ENSMUST00000196373 1552 ntBASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm11890-201ENSMUST00000119585 417 ntBASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm5391-201ENSMUST00000121155 613 ntBASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm22637-201ENSMUST00000158144 283 ntBASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm16318-201ENSMUST00000162402 601 ntBASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm16558-201ENSMUST00000163015 532 ntBASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm13249-201ENSMUST00000177803 345 ntBASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm21816-201ENSMUST00000179255 360 ntBASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm13144-201ENSMUST00000179385 345 ntBASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Srp54bE9PXC0 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm42830-201ENSMUST00000196642 313 ntBASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm43478-201ENSMUST00000200381 292 ntBASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm6171-201ENSMUST00000220760 645 ntBASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.41□□□□□ -1.7
Srp54bE9PXC0 AC130547.1-201ENSMUST00000228079 1047 ntBASIC4.41□□□□□ -1.7
Srp54bE9PXC0 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm23928-201ENSMUST00000082469 145 ntBASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm25799-201ENSMUST00000082643 107 ntBASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Srp54bE9PXC0 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.41□□□□□ -1.7
Srp54bE9PXC0 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
Srp54bE9PXC0 Gm7451-201ENSMUST00000208382 1392 ntBASIC4.4□□□□□ -1.7
Srp54bE9PXC0 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Srp54bE9PXC0 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Srp54bE9PXC0 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Srp54bE9PXC0 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Srp54bE9PXC0 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
Srp54bE9PXC0 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Srp54bE9PXC0 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm26367-201ENSMUST00000104165 132 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm23481-201ENSMUST00000104173 131 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm23743-201ENSMUST00000157389 274 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm24965-201ENSMUST00000157922 106 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm29556-201ENSMUST00000187591 696 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm9775-201ENSMUST00000189402 331 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm28872-201ENSMUST00000191518 158 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm38150-201ENSMUST00000192996 452 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm37881-201ENSMUST00000193001 421 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm37095-201ENSMUST00000195421 205 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm43825-201ENSMUST00000199650 734 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm5339-201ENSMUST00000210551 1102 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm18320-201ENSMUST00000211304 595 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 AC139638.1-201ENSMUST00000218027 364 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 AC159472.1-201ENSMUST00000218178 463 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm10780-201ENSMUST00000099459 285 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm43990-201ENSMUST00000203790 1691 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.4□□□□□ -1.71
Srp54bE9PXC0 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.39□□□□□ -1.71
Srp54bE9PXC0 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Srp54bE9PXC0 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms