Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm6625-201ENSMUST00000177870 272 ntBASIC3.29□□□□□ -1.88
Col6a4A2AX52 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.29□□□□□ -1.88
Col6a4A2AX52 Gm43774-201ENSMUST00000196327 878 ntBASIC3.29□□□□□ -1.88
Col6a4A2AX52 Gm44355-201ENSMUST00000200417 104 ntBASIC3.29□□□□□ -1.88
Col6a4A2AX52 Gm36776-201ENSMUST00000207006 203 ntBASIC3.29□□□□□ -1.88
Col6a4A2AX52 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.29□□□□□ -1.88
Col6a4A2AX52 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.29□□□□□ -1.88
Col6a4A2AX52 AC168059.1-201ENSMUST00000225846 841 ntBASIC3.29□□□□□ -1.88
Col6a4A2AX52 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a4A2AX52 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Col6a4A2AX52 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col6a4A2AX52 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col6a4A2AX52 Gm42680-201ENSMUST00000196238 2500 ntBASIC3.29□□□□□ -1.88
Col6a4A2AX52 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col6a4A2AX52 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a4A2AX52 AC113059.2-201ENSMUST00000213462 3016 ntBASIC3.29□□□□□ -1.88
Col6a4A2AX52 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.29□□□□□ -1.88
Col6a4A2AX52 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col6a4A2AX52 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a4A2AX52 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Col6a4A2AX52 Gm24138-201ENSMUST00000157572 114 ntBASIC3.28□□□□□ -1.88
Col6a4A2AX52 Gm22156-201ENSMUST00000158409 141 ntBASIC3.28□□□□□ -1.88
Col6a4A2AX52 Gm20399-201ENSMUST00000174652 132 ntBASIC3.28□□□□□ -1.88
Col6a4A2AX52 Gm7634-201ENSMUST00000185778 553 ntBASIC3.28□□□□□ -1.88
Col6a4A2AX52 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.28□□□□□ -1.88
Col6a4A2AX52 Gm43036-201ENSMUST00000200594 373 ntBASIC3.28□□□□□ -1.88
Col6a4A2AX52 Gm8035-201ENSMUST00000204625 687 ntBASIC3.28□□□□□ -1.88
Col6a4A2AX52 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.28□□□□□ -1.88
Col6a4A2AX52 Gm5265-201ENSMUST00000076828 342 ntBASIC3.28□□□□□ -1.88
Col6a4A2AX52 Gm25480-201ENSMUST00000083217 133 ntBASIC3.28□□□□□ -1.88
Col6a4A2AX52 Mir101b-201ENSMUST00000083622 97 ntBASIC3.28□□□□□ -1.88
Col6a4A2AX52 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col6a4A2AX52 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Col6a4A2AX52 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Col6a4A2AX52 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col6a4A2AX52 Gm37488-201ENSMUST00000195434 3374 ntBASIC3.28□□□□□ -1.88
Col6a4A2AX52 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col6a4A2AX52 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.28□□□□□ -1.88
Col6a4A2AX52 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Col6a4A2AX52 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col6a4A2AX52 Gm43606-201ENSMUST00000195938 3556 ntBASIC3.28□□□□□ -1.88
Col6a4A2AX52 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Col6a4A2AX52 Gm23532-201ENSMUST00000104569 112 ntBASIC3.28□□□□□ -1.88
Col6a4A2AX52 Gm25539-201ENSMUST00000116886 122 ntBASIC3.28□□□□□ -1.88
Col6a4A2AX52 Gm7281-201ENSMUST00000160010 543 ntBASIC3.28□□□□□ -1.88
Col6a4A2AX52 Gm26141-201ENSMUST00000175299 126 ntBASIC3.28□□□□□ -1.88
Col6a4A2AX52 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col6a4A2AX52 Gm37300-201ENSMUST00000193327 280 ntBASIC3.28□□□□□ -1.88
Col6a4A2AX52 Gm19154-201ENSMUST00000223330 940 ntBASIC3.28□□□□□ -1.88
Col6a4A2AX52 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col6a4A2AX52 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC3.28□□□□□ -1.88
Col6a4A2AX52 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Col6a4A2AX52 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col6a4A2AX52 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col6a4A2AX52 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.28□□□□□ -1.88
Col6a4A2AX52 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col6a4A2AX52 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
Col6a4A2AX52 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.28□□□□□ -1.89
Col6a4A2AX52 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
Col6a4A2AX52 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
Col6a4A2AX52 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a4A2AX52 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a4A2AX52 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a4A2AX52 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a4A2AX52 Gm23609-201ENSMUST00000104542 127 ntBASIC3.27□□□□□ -1.89
Col6a4A2AX52 Gm14973-201ENSMUST00000117248 255 ntBASIC3.27□□□□□ -1.89
Col6a4A2AX52 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a4A2AX52 Gm11408-201ENSMUST00000117889 519 ntBASIC3.27□□□□□ -1.89
Col6a4A2AX52 Gm25519-201ENSMUST00000158392 127 ntBASIC3.27□□□□□ -1.89
Col6a4A2AX52 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col6a4A2AX52 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC3.27□□□□□ -1.89
Col6a4A2AX52 Gm18529-201ENSMUST00000193025 1257 ntBASIC3.27□□□□□ -1.89
Col6a4A2AX52 Gm29747-201ENSMUST00000194764 585 ntBASIC3.27□□□□□ -1.89
Col6a4A2AX52 Gm43028-201ENSMUST00000202561 481 ntBASIC3.27□□□□□ -1.89
Col6a4A2AX52 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Col6a4A2AX52 Gm44600-201ENSMUST00000208540 111 ntBASIC3.27□□□□□ -1.89
Col6a4A2AX52 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a4A2AX52 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a4A2AX52 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a4A2AX52 Gm4987-201ENSMUST00000078326 408 ntBASIC3.27□□□□□ -1.89
Col6a4A2AX52 Mir30e-201ENSMUST00000083475 92 ntBASIC3.27□□□□□ -1.89
Col6a4A2AX52 Mir370-201ENSMUST00000083499 79 ntBASIC3.27□□□□□ -1.89
Col6a4A2AX52 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a4A2AX52 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a4A2AX52 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col6a4A2AX52 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Col6a4A2AX52 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a4A2AX52 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Col6a4A2AX52 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a4A2AX52 Gm45697-201ENSMUST00000212893 2876 ntBASIC3.27□□□□□ -1.89
Col6a4A2AX52 Gm11761-201ENSMUST00000121392 445 ntBASIC3.27□□□□□ -1.89
Col6a4A2AX52 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a4A2AX52 Gm4644-201ENSMUST00000197587 400 ntBASIC3.27□□□□□ -1.89
Col6a4A2AX52 Gm43344-201ENSMUST00000198723 1229 ntBASIC3.27□□□□□ -1.89
Col6a4A2AX52 AC161256.1-201ENSMUST00000217312 213 ntBASIC3.27□□□□□ -1.89
Col6a4A2AX52 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC3.27□□□□□ -1.89
Col6a4A2AX52 AC158981.3-201ENSMUST00000226844 1024 ntBASIC3.27□□□□□ -1.89
Col6a4A2AX52 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Col6a4A2AX52 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a4A2AX52 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms