Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm43596-201ENSMUST00000202818 884 ntBASIC4.04□□□□□ -1.76
Scn1aA2APX8 Gm45162-201ENSMUST00000209013 618 ntBASIC4.04□□□□□ -1.76
Scn1aA2APX8 Gm7034-201ENSMUST00000218638 645 ntBASIC4.04□□□□□ -1.76
Scn1aA2APX8 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Scn1aA2APX8 Gm4991-201ENSMUST00000118899 1552 ntBASIC4.04□□□□□ -1.76
Scn1aA2APX8 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.04□□□□□ -1.76
Scn1aA2APX8 Gm12586-201ENSMUST00000117328 1316 ntBASIC4.04□□□□□ -1.76
Scn1aA2APX8 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Scn1aA2APX8 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Scn1aA2APX8 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Scn1aA2APX8 Gm26075-201ENSMUST00000104062 121 ntBASIC4.04□□□□□ -1.76
Scn1aA2APX8 Gm24608-201ENSMUST00000104381 136 ntBASIC4.04□□□□□ -1.76
Scn1aA2APX8 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Scn1aA2APX8 Gm5368-201ENSMUST00000189012 589 ntBASIC4.04□□□□□ -1.76
Scn1aA2APX8 Gm6649-201ENSMUST00000199743 1165 ntBASIC4.04□□□□□ -1.76
Scn1aA2APX8 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Scn1aA2APX8 Olfr480-201ENSMUST00000071658 1029 ntBASIC4.04□□□□□ -1.76
Scn1aA2APX8 Gm23518-201ENSMUST00000082835 153 ntBASIC4.04□□□□□ -1.76
Scn1aA2APX8 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Scn1aA2APX8 Gm10704-201ENSMUST00000098952 730 ntBASIC4.04□□□□□ -1.76
Scn1aA2APX8 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.03□□□□□ -1.76
Scn1aA2APX8 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Scn1aA2APX8 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Scn1aA2APX8 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Scn1aA2APX8 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Scn1aA2APX8 Gm13831-201ENSMUST00000118764 302 ntBASIC4.03□□□□□ -1.76
Scn1aA2APX8 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Scn1aA2APX8 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC4.03□□□□□ -1.76
Scn1aA2APX8 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC4.03□□□□□ -1.76
Scn1aA2APX8 Gm20693-201ENSMUST00000177431 211 ntBASIC4.03□□□□□ -1.76
Scn1aA2APX8 Gm42666-201ENSMUST00000201954 152 ntBASIC4.03□□□□□ -1.76
Scn1aA2APX8 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Scn1aA2APX8 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Scn1aA2APX8 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Scn1aA2APX8 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Scn1aA2APX8 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Scn1aA2APX8 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Scn1aA2APX8 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Scn1aA2APX8 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Scn1aA2APX8 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Scn1aA2APX8 Gm13690-201ENSMUST00000118989 285 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 Gm9435-201ENSMUST00000120379 877 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 Mir1903-201ENSMUST00000122574 80 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 Gm13092-201ENSMUST00000136346 260 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 Gm15534-201ENSMUST00000137642 562 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Scn1aA2APX8 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Scn1aA2APX8 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Scn1aA2APX8 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.02□□□□□ -1.77
Scn1aA2APX8 Gm20177-201ENSMUST00000203705 334 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Scn1aA2APX8 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.02□□□□□ -1.77
Scn1aA2APX8 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.02□□□□□ -1.77
Scn1aA2APX8 Gm7786-201ENSMUST00000210494 436 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 Gm45574-201ENSMUST00000210921 331 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 AC129323.1-201ENSMUST00000216733 470 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 AC153544.1-201ENSMUST00000217988 400 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 Gm18120-201ENSMUST00000220079 511 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 AC154419.1-201ENSMUST00000227627 272 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 Gm26063-201ENSMUST00000083378 107 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
Scn1aA2APX8 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Scn1aA2APX8 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Scn1aA2APX8 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Scn1aA2APX8 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Scn1aA2APX8 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Scn1aA2APX8 Gm11233-201ENSMUST00000122357 634 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.02□□□□□ -1.77
Scn1aA2APX8 Gm16026-202ENSMUST00000159695 772 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 Gm25817-201ENSMUST00000177758 121 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Scn1aA2APX8 Gm24766-201ENSMUST00000179182 121 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 Gm27033-201ENSMUST00000183226 544 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 Gm2617-201ENSMUST00000185690 1066 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 Scgb2b6-201ENSMUST00000188132 330 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC4.02□□□□□ -1.77
Scn1aA2APX8 Gm43491-201ENSMUST00000197133 784 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 AC117949.2-201ENSMUST00000225900 584 ntBASIC4.02□□□□□ -1.77
Scn1aA2APX8 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Scn1aA2APX8 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Scn1aA2APX8 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Scn1aA2APX8 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Scn1aA2APX8 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.02□□□□□ -1.77
Scn1aA2APX8 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Scn1aA2APX8 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.01□□□□□ -1.77
Scn1aA2APX8 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Scn1aA2APX8 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Scn1aA2APX8 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.01□□□□□ -1.77
Scn1aA2APX8 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.01□□□□□ -1.77
Scn1aA2APX8 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Scn1aA2APX8 Gm11566-201ENSMUST00000118550 203 ntBASIC4.01□□□□□ -1.77
Scn1aA2APX8 Gm22480-201ENSMUST00000122568 128 ntBASIC4.01□□□□□ -1.77
Scn1aA2APX8 Gm28186-201ENSMUST00000187447 679 ntBASIC4.01□□□□□ -1.77
Scn1aA2APX8 Gm43276-201ENSMUST00000199712 364 ntBASIC4.01□□□□□ -1.77
Scn1aA2APX8 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms