Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm37192-201ENSMUST00000194479 1348 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm44847-201ENSMUST00000207104 1991 ntBASIC3.91□□□□□ -1.78
Trem1Q9JKE2 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Trem1Q9JKE2 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Trem1Q9JKE2 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Trem1Q9JKE2 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.9□□□□□ -1.78
Trem1Q9JKE2 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC3.9□□□□□ -1.78
Trem1Q9JKE2 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Trem1Q9JKE2 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Trem1Q9JKE2 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Gm12982-201ENSMUST00000117408 190 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Gm11406-201ENSMUST00000117418 484 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Gm16106-201ENSMUST00000119187 294 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Gm5391-201ENSMUST00000121155 613 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Gm13149-201ENSMUST00000122071 339 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Gm3160-201ENSMUST00000128343 607 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Gm26086-201ENSMUST00000157902 263 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Gm23030-201ENSMUST00000158004 273 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Gm3145-201ENSMUST00000188584 220 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Gm29523-201ENSMUST00000191415 699 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Gm18984-201ENSMUST00000193998 1124 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Gm5885-202ENSMUST00000203357 528 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Gm44776-201ENSMUST00000207212 381 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Gm45777-201ENSMUST00000213009 301 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 AC123832.2-201ENSMUST00000215151 129 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC3.9□□□□□ -1.79
Trem1Q9JKE2 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trem1Q9JKE2 AC151902.1-201ENSMUST00000227800 375 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 CT025525.3-201ENSMUST00000228858 366 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Gm5185-201ENSMUST00000080271 619 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Trem1Q9JKE2 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trem1Q9JKE2 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Gm12467-201ENSMUST00000117625 745 ntBASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Gm9003-201ENSMUST00000121810 482 ntBASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Gm14710-201ENSMUST00000146082 1066 ntBASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Gm23673-201ENSMUST00000157474 298 ntBASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Gm23539-201ENSMUST00000157537 224 ntBASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Gm16107-201ENSMUST00000162523 862 ntBASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Gm37881-201ENSMUST00000193001 421 ntBASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Gm20056-201ENSMUST00000194813 519 ntBASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Gm43814-201ENSMUST00000197851 413 ntBASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Gm44583-201ENSMUST00000207478 281 ntBASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Gm45608-201ENSMUST00000210948 389 ntBASIC3.89□□□□□ -1.79
Trem1Q9JKE2 AC153801.1-201ENSMUST00000217904 947 ntBASIC3.89□□□□□ -1.79
Trem1Q9JKE2 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 AC155266.1-201ENSMUST00000220762 904 ntBASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Gm7045-201ENSMUST00000221466 605 ntBASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
Trem1Q9JKE2 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms