Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm43990-201ENSMUST00000203790 1691 ntBASIC4□□□□□ -1.77
Lima1Q9ERG0 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Mir147-201ENSMUST00000102354 79 ntBASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Gm11673-201ENSMUST00000117846 331 ntBASIC3.99□□□□□ -1.77
Lima1Q9ERG0 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Klra14-ps-201ENSMUST00000119532 802 ntBASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Gm15225-201ENSMUST00000120449 1017 ntBASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Gm6565-201ENSMUST00000121217 438 ntBASIC3.99□□□□□ -1.77
Lima1Q9ERG0 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Gm22135-201ENSMUST00000158752 108 ntBASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Gm3191-201ENSMUST00000167139 346 ntBASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Gm27899-201ENSMUST00000184715 64 ntBASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Gm37710-201ENSMUST00000193501 1274 ntBASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Gm35702-201ENSMUST00000198653 511 ntBASIC3.99□□□□□ -1.77
Lima1Q9ERG0 CT573086.3-201ENSMUST00000228762 594 ntBASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 n-R5s160-201ENSMUST00000083096 120 ntBASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Gm23099-201ENSMUST00000083454 139 ntBASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Gm7381-201ENSMUST00000098958 300 ntBASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Gm18422-202ENSMUST00000203798 2214 ntBASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Gm3665-201ENSMUST00000177214 2461 ntBASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
Lima1Q9ERG0 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Gm37668-201ENSMUST00000193745 1944 ntBASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Gm24788-201ENSMUST00000104283 156 ntBASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Gm12988-201ENSMUST00000119054 478 ntBASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Gm6373-201ENSMUST00000121026 360 ntBASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Gm22453-201ENSMUST00000122801 318 ntBASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Gm27286-201ENSMUST00000184934 179 ntBASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Gm29228-201ENSMUST00000185489 418 ntBASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Gm2950-201ENSMUST00000185530 520 ntBASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Gm28625-201ENSMUST00000188309 205 ntBASIC3.98□□□□□ -1.77
Lima1Q9ERG0 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Gm38088-201ENSMUST00000195829 241 ntBASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Gm3690-201ENSMUST00000211341 262 ntBASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.98□□□□□ -1.77
Lima1Q9ERG0 AC158525.1-201ENSMUST00000223806 576 ntBASIC3.98□□□□□ -1.77
Lima1Q9ERG0 AC156803.1-201ENSMUST00000224407 820 ntBASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC3.98□□□□□ -1.77
Lima1Q9ERG0 AC158955.1-201ENSMUST00000227140 385 ntBASIC3.98□□□□□ -1.77
Lima1Q9ERG0 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Lima1Q9ERG0 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Lima1Q9ERG0 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Lima1Q9ERG0 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.97□□□□□ -1.77
Lima1Q9ERG0 AC123858.1-201ENSMUST00000226948 1874 ntBASIC3.97□□□□□ -1.77
Lima1Q9ERG0 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Lima1Q9ERG0 Gm37124-201ENSMUST00000192140 1992 ntBASIC3.97□□□□□ -1.77
Lima1Q9ERG0 Gm9427-201ENSMUST00000116187 651 ntBASIC3.97□□□□□ -1.77
Lima1Q9ERG0 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC3.97□□□□□ -1.77
Lima1Q9ERG0 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Lima1Q9ERG0 Gm15377-201ENSMUST00000119594 246 ntBASIC3.97□□□□□ -1.77
Lima1Q9ERG0 Gm13788-201ENSMUST00000120767 601 ntBASIC3.97□□□□□ -1.77
Lima1Q9ERG0 Llph-ps1-201ENSMUST00000121281 390 ntBASIC3.97□□□□□ -1.77
Lima1Q9ERG0 Gm3757-201ENSMUST00000125878 675 ntBASIC3.97□□□□□ -1.77
Lima1Q9ERG0 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC3.97□□□□□ -1.77
Lima1Q9ERG0 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC3.97□□□□□ -1.77
Lima1Q9ERG0 Gm23753-201ENSMUST00000157575 149 ntBASIC3.97□□□□□ -1.77
Lima1Q9ERG0 Gm26001-201ENSMUST00000157989 103 ntBASIC3.97□□□□□ -1.77
Lima1Q9ERG0 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Lima1Q9ERG0 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC3.97□□□□□ -1.77
Lima1Q9ERG0 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC3.97□□□□□ -1.77
Lima1Q9ERG0 Gm28859-201ENSMUST00000186650 616 ntBASIC3.97□□□□□ -1.77
Lima1Q9ERG0 Gm5372-201ENSMUST00000187540 409 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms