Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Gm13733-201ENSMUST00000117290 535 ntBASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Gm11718-201ENSMUST00000119942 537 ntBASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Gm11692-201ENSMUST00000122121 902 ntBASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Gm23465-201ENSMUST00000157134 262 ntBASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Gm24939-201ENSMUST00000158325 137 ntBASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Gm6947-201ENSMUST00000186254 78 ntBASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Gm28396-201ENSMUST00000190309 379 ntBASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Gm5829-201ENSMUST00000191383 351 ntBASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Gm6366-201ENSMUST00000198766 826 ntBASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Gm4045-201ENSMUST00000204076 310 ntBASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Gm18320-201ENSMUST00000211304 595 ntBASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 AC154634.3-201ENSMUST00000224589 736 ntBASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 AC096628.1-201ENSMUST00000226060 641 ntBASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Gm26072-201ENSMUST00000083135 107 ntBASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Gm10242-201ENSMUST00000090064 330 ntBASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 AC154184.1-201ENSMUST00000224375 1620 ntBASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Hmgn3Q9DCB1 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 AC122357.2-201ENSMUST00000220732 1525 ntBASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 Gm44678-201ENSMUST00000207828 2775 ntBASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 Gm6373-201ENSMUST00000121026 360 ntBASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 Gm23906-201ENSMUST00000157573 128 ntBASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 Gm26085-201ENSMUST00000157900 116 ntBASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 Gm5974-201ENSMUST00000181607 986 ntBASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 Gm43476-201ENSMUST00000197873 405 ntBASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 AC162183.1-202ENSMUST00000225434 904 ntBASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 AC168059.1-201ENSMUST00000225846 841 ntBASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Hmgn3Q9DCB1 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Gm42991-201ENSMUST00000196468 3837 ntBASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Gm14750-201ENSMUST00000118262 516 ntBASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Gm13314-201ENSMUST00000118742 335 ntBASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Gm22219-201ENSMUST00000157562 319 ntBASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Gm23257-201ENSMUST00000158322 132 ntBASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Gm27564-201ENSMUST00000185196 96 ntBASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Gm29428-201ENSMUST00000190086 409 ntBASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Gm28724-202ENSMUST00000194218 295 ntBASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Gm42453-201ENSMUST00000200477 409 ntBASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Gm44032-201ENSMUST00000204841 166 ntBASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Gm18194-201ENSMUST00000210455 481 ntBASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Gm18510-201ENSMUST00000219335 1096 ntBASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 AC159244.1-201ENSMUST00000220964 594 ntBASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Mir30e-201ENSMUST00000083475 92 ntBASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Hmgn3Q9DCB1 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Hmgn3Q9DCB1 AC103672.3-201ENSMUST00000227649 3243 ntBASIC3.59□□□□□ -1.84
Hmgn3Q9DCB1 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Hmgn3Q9DCB1 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Hmgn3Q9DCB1 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.58□□□□□ -1.84
Hmgn3Q9DCB1 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.58□□□□□ -1.84
Hmgn3Q9DCB1 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmgn3Q9DCB1 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmgn3Q9DCB1 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms