Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Gm44474-201ENSMUST00000196525 127 ntBASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Gm43828-201ENSMUST00000196890 639 ntBASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Igkv12-47-201ENSMUST00000196961 356 ntBASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Gm43015-201ENSMUST00000199087 565 ntBASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Gm6051-201ENSMUST00000201529 352 ntBASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Gm42666-201ENSMUST00000201954 152 ntBASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Gm44879-201ENSMUST00000207007 503 ntBASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Vps28Q9D1C8 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Gm45651-201ENSMUST00000210857 335 ntBASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Gm45409-201ENSMUST00000211486 252 ntBASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Gm45857-201ENSMUST00000212207 356 ntBASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC4.74□□□□□ -1.65
Vps28Q9D1C8 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC4.74□□□□□ -1.65
Vps28Q9D1C8 AC126043.1-201ENSMUST00000221304 1141 ntBASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Gm6065-201ENSMUST00000081336 492 ntBASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Gm6043-201ENSMUST00000099961 492 ntBASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Vps28Q9D1C8 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Vps28Q9D1C8 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Gm43188-201ENSMUST00000200180 2160 ntBASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Vps28Q9D1C8 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 AC134860.3-201ENSMUST00000223564 1300 ntBASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Gm45577-201ENSMUST00000210206 2287 ntBASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Gm25317-201ENSMUST00000116824 129 ntBASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Gm12466-201ENSMUST00000121199 620 ntBASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Gm13220-201ENSMUST00000121535 508 ntBASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Gm12327-201ENSMUST00000121729 1168 ntBASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Mup-ps4-201ENSMUST00000151005 539 ntBASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Gm25278-201ENSMUST00000157267 120 ntBASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Mir6410-201ENSMUST00000184204 104 ntBASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Gm43304-201ENSMUST00000196803 326 ntBASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Gm45171-201ENSMUST00000206360 736 ntBASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Gm4501-201ENSMUST00000207330 551 ntBASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Gm4558-201ENSMUST00000207886 521 ntBASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Gm4528-201ENSMUST00000207905 551 ntBASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 AC159242.1-201ENSMUST00000225832 194 ntBASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Gm6177-201ENSMUST00000085589 465 ntBASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Vps28Q9D1C8 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.73□□□□□ -1.65
Vps28Q9D1C8 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Gm8569-201ENSMUST00000117630 647 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Defa-ps1-201ENSMUST00000119062 282 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Gm14861-201ENSMUST00000119451 455 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Gm16053-201ENSMUST00000120511 188 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Mup-ps13-201ENSMUST00000120662 545 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Mup-ps1-201ENSMUST00000120720 544 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms