Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm14601-201ENSMUST00000120892 236 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm12096-201ENSMUST00000121149 829 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Llph-ps2-201ENSMUST00000122000 393 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm26401-201ENSMUST00000158502 76 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm22991-201ENSMUST00000178126 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm25754-201ENSMUST00000178653 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm22419-201ENSMUST00000178780 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm24802-201ENSMUST00000178897 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm25208-201ENSMUST00000178964 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm24567-201ENSMUST00000179294 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm23943-201ENSMUST00000179712 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm25228-201ENSMUST00000180121 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm23304-201ENSMUST00000180209 121 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm29509-201ENSMUST00000185716 321 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm29598-201ENSMUST00000188996 588 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm37946-201ENSMUST00000192064 347 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm29813-201ENSMUST00000195856 447 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm44254-201ENSMUST00000204184 322 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm44820-201ENSMUST00000207420 396 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm46146-201ENSMUST00000217483 346 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 AC239878.1-201ENSMUST00000224212 506 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 AC108945.1-201ENSMUST00000226477 94 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm7117-201ENSMUST00000071515 387 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm23459-201ENSMUST00000083259 131 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ddx56Q9D0R4 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm42614-201ENSMUST00000198724 1554 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm37527-201ENSMUST00000192406 3547 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm16082-201ENSMUST00000115992 377 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm11550-201ENSMUST00000118210 699 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm15785-201ENSMUST00000119145 694 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm16445-201ENSMUST00000120399 714 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm5646-201ENSMUST00000120568 714 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm12607-201ENSMUST00000120724 493 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm16458-201ENSMUST00000121428 502 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm14559-201ENSMUST00000121745 496 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm24517-201ENSMUST00000122560 107 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm23964-201ENSMUST00000157966 107 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm27818-201ENSMUST00000184536 159 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm6445-201ENSMUST00000189515 1112 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm17777-201ENSMUST00000189740 1276 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm19214-201ENSMUST00000191956 1083 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm9134-201ENSMUST00000193186 551 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm43096-201ENSMUST00000196173 421 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm5552-201ENSMUST00000197149 515 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm42459-201ENSMUST00000199679 742 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm18691-201ENSMUST00000203593 872 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm44092-201ENSMUST00000204470 258 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 AC133598.4-202ENSMUST00000225267 469 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 CT025157.1-201ENSMUST00000226241 292 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm26330-201ENSMUST00000082817 104 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm25404-201ENSMUST00000082970 107 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Mir133b-201ENSMUST00000083546 119 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms