Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Gm7754-201ENSMUST00000223075 2064 ntBASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Gm22758-201ENSMUST00000102275 96 ntBASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Gm23273-201ENSMUST00000104058 135 ntBASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Gm14714-201ENSMUST00000119743 439 ntBASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Gm6969-201ENSMUST00000140065 342 ntBASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Gm22637-201ENSMUST00000158144 283 ntBASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Gm27457-201ENSMUST00000184771 156 ntBASIC4.87□□□□□ -1.63
Smc1aQ9CU62 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Gm43604-201ENSMUST00000199799 705 ntBASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Gm43892-201ENSMUST00000204373 265 ntBASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Gm44869-201ENSMUST00000208836 357 ntBASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Gm3690-201ENSMUST00000211341 262 ntBASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Diaph3-206ENSMUST00000226745 713 ntBASIC4.87□□□□□ -1.63
Smc1aQ9CU62 AC117202.1-201ENSMUST00000227007 445 ntBASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Gm25007-201ENSMUST00000083808 133 ntBASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Gm44286-201ENSMUST00000204098 1487 ntBASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.87□□□□□ -1.63
Smc1aQ9CU62 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Gm23709-201ENSMUST00000104364 130 ntBASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Gm15385-201ENSMUST00000118725 667 ntBASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Gm28830-201ENSMUST00000188192 213 ntBASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Gm43491-201ENSMUST00000197133 784 ntBASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Gm29793-201ENSMUST00000202874 460 ntBASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Gm45434-201ENSMUST00000210550 293 ntBASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Gm7093-201ENSMUST00000223004 581 ntBASIC4.86□□□□□ -1.63
Smc1aQ9CU62 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.86□□□□□ -1.63
Smc1aQ9CU62 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Mir202-201ENSMUST00000083568 72 ntBASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.86□□□□□ -1.63
Smc1aQ9CU62 AC159476.1-201ENSMUST00000215914 1668 ntBASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.86□□□□□ -1.63
Smc1aQ9CU62 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Synpr-207ENSMUST00000223583 3362 ntBASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Gm13459-201ENSMUST00000121558 646 ntBASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Gm7846-201ENSMUST00000145844 274 ntBASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Gm18985-201ENSMUST00000196472 1079 ntBASIC4.85□□□□□ -1.63
Smc1aQ9CU62 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Smc1aQ9CU62 Gm3338-201ENSMUST00000220982 269 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms