Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Msh4Q99MT2 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Msh4Q99MT2 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Msh4Q99MT2 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Msh4Q99MT2 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Msh4Q99MT2 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC4.7□□□□□ -1.66
Msh4Q99MT2 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 Gm11822-201ENSMUST00000119177 415 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 Gm11631-201ENSMUST00000119220 156 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 Gm14238-201ENSMUST00000120227 323 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 Gm22478-201ENSMUST00000122570 154 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Gm16566-201ENSMUST00000160387 910 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 Gm3531-201ENSMUST00000162698 489 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC4.69□□□□□ -1.66
Msh4Q99MT2 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Gm18354-201ENSMUST00000173515 1068 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 Gm19807-201ENSMUST00000173971 667 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 Gm20648-201ENSMUST00000175815 328 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 Rab26os-201ENSMUST00000176215 477 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 Gm8807-201ENSMUST00000179328 492 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 Gm9569-201ENSMUST00000187492 787 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Gm20056-201ENSMUST00000194813 519 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Trav3-2-201ENSMUST00000198999 305 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC4.69□□□□□ -1.66
Msh4Q99MT2 AC127279.1-201ENSMUST00000220140 637 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 AC160931.2-201ENSMUST00000221445 351 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 Gm7822-201ENSMUST00000222433 581 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 Vmn1r89-206ENSMUST00000227319 985 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC4.69□□□□□ -1.66
Msh4Q99MT2 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.69□□□□□ -1.66
Msh4Q99MT2 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Msh4Q99MT2 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Msh4Q99MT2 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC4.68□□□□□ -1.66
Msh4Q99MT2 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm44535-201ENSMUST00000208889 3136 ntBASIC4.68□□□□□ -1.66
Msh4Q99MT2 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Msh4Q99MT2 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.68□□□□□ -1.66
Msh4Q99MT2 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.68□□□□□ -1.66
Msh4Q99MT2 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.68□□□□□ -1.66
Msh4Q99MT2 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Msh4Q99MT2 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Msh4Q99MT2 Mir147-201ENSMUST00000102354 79 ntBASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm25097-201ENSMUST00000104042 145 ntBASIC4.68□□□□□ -1.66
Msh4Q99MT2 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Msh4Q99MT2 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm11898-201ENSMUST00000117161 385 ntBASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm15854-201ENSMUST00000118879 808 ntBASIC4.68□□□□□ -1.66
Msh4Q99MT2 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm14927-201ENSMUST00000120283 454 ntBASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm26310-201ENSMUST00000157766 117 ntBASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm24402-201ENSMUST00000157873 91 ntBASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm6650-201ENSMUST00000166710 614 ntBASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm8214-201ENSMUST00000172123 351 ntBASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm5777-201ENSMUST00000177265 448 ntBASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm19206-201ENSMUST00000186401 827 ntBASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm42509-201ENSMUST00000197390 781 ntBASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm43596-201ENSMUST00000202818 884 ntBASIC4.68□□□□□ -1.66
Msh4Q99MT2 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm18997-201ENSMUST00000216353 822 ntBASIC4.68□□□□□ -1.66
Msh4Q99MT2 Gm19936-201ENSMUST00000216414 838 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms