Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Brf1Q8CFK2 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Gm16089-201ENSMUST00000117679 336 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Gm12734-201ENSMUST00000120228 948 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Gm13149-201ENSMUST00000122071 339 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Gm13214-201ENSMUST00000122137 408 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Gm22555-201ENSMUST00000157801 62 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Gm29263-201ENSMUST00000188718 463 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Gm7142-201ENSMUST00000194232 586 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Gm43198-201ENSMUST00000200927 326 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Gm7587-201ENSMUST00000207618 1021 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 AL935138.1-201ENSMUST00000215309 196 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Gm18252-203ENSMUST00000215855 757 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Gm7530-201ENSMUST00000218466 605 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Gm5176-202ENSMUST00000220267 583 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 AC140930.4-201ENSMUST00000220750 150 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.67□□□□□ -1.5
Brf1Q8CFK2 AC158523.2-201ENSMUST00000222708 548 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Brf1Q8CFK2 n-R5s168-201ENSMUST00000083948 104 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Gm43888-201ENSMUST00000204405 2587 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Gm42614-201ENSMUST00000198724 1554 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 AC155805.1-201ENSMUST00000222419 3808 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Brf1Q8CFK2 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Brf1Q8CFK2 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm45577-201ENSMUST00000210206 2287 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm24117-201ENSMUST00000103973 133 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm11914-201ENSMUST00000117094 507 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm11366-201ENSMUST00000119279 429 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm16458-201ENSMUST00000121428 502 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Ear-ps7-201ENSMUST00000161287 442 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm3339-201ENSMUST00000163462 475 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm9632-201ENSMUST00000195934 643 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm44319-201ENSMUST00000196974 93 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm43005-201ENSMUST00000199015 648 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm5284-201ENSMUST00000199053 903 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm18729-201ENSMUST00000217230 621 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm19599-201ENSMUST00000218898 358 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 AC126673.2-201ENSMUST00000221052 686 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 AC131085.1-201ENSMUST00000224746 656 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 AC170086.1-201ENSMUST00000225190 497 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm10115-201ENSMUST00000076071 1228 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm16415-201ENSMUST00000080097 489 ntBASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms