Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 Gm29281-201ENSMUST00000188077 381 ntBASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 Gm43730-201ENSMUST00000199863 372 ntBASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 AC173345.3-201ENSMUST00000221245 1093 ntBASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 n-R5s220-201ENSMUST00000082926 120 ntBASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc38Q8CDN8 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm26376-201ENSMUST00000104784 110 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm12520-201ENSMUST00000117493 316 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm11398-201ENSMUST00000120330 320 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Zakit-201ENSMUST00000157677 308 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm28574-201ENSMUST00000185757 699 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm28781-201ENSMUST00000185760 696 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm28339-201ENSMUST00000185845 696 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm28596-201ENSMUST00000185870 696 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm29062-201ENSMUST00000186032 694 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm29574-201ENSMUST00000186226 696 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm28828-201ENSMUST00000186601 696 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm28057-201ENSMUST00000186603 615 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm28255-201ENSMUST00000187101 694 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm29307-201ENSMUST00000187367 696 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm28397-201ENSMUST00000187970 699 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm29634-201ENSMUST00000188467 696 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm28896-201ENSMUST00000188609 696 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm29545-201ENSMUST00000188878 694 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm28699-201ENSMUST00000189193 696 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm29196-201ENSMUST00000189239 618 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm29339-201ENSMUST00000189613 696 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm28190-201ENSMUST00000189766 722 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm28159-201ENSMUST00000190296 696 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm29366-201ENSMUST00000190481 699 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm29407-201ENSMUST00000191468 696 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm19214-201ENSMUST00000191956 1083 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm32295-201ENSMUST00000192558 696 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm37433-201ENSMUST00000192695 678 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm18900-201ENSMUST00000193218 584 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm31260-201ENSMUST00000193478 696 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm37441-201ENSMUST00000194430 678 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm38107-201ENSMUST00000194873 696 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Mir1892-201ENSMUST00000197752 80 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm7045-201ENSMUST00000221466 605 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm10794-201ENSMUST00000099624 207 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc38Q8CDN8 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.78□□□□□ -1.64
Ccdc38Q8CDN8 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc38Q8CDN8 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc38Q8CDN8 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Ccdc38Q8CDN8 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ccdc38Q8CDN8 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ccdc38Q8CDN8 Gm15752-201ENSMUST00000117427 394 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms