Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.55□□□□□ -1.68
Nup98Q6PFD9 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Nup98Q6PFD9 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Nup98Q6PFD9 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Nup98Q6PFD9 Gm23322-201ENSMUST00000104464 167 ntBASIC4.55□□□□□ -1.68
Nup98Q6PFD9 Gm13664-201ENSMUST00000117304 345 ntBASIC4.55□□□□□ -1.68
Nup98Q6PFD9 Gm14714-201ENSMUST00000119743 439 ntBASIC4.55□□□□□ -1.68
Nup98Q6PFD9 Gm20693-201ENSMUST00000177431 211 ntBASIC4.55□□□□□ -1.68
Nup98Q6PFD9 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Nup98Q6PFD9 Gm37343-201ENSMUST00000192542 111 ntBASIC4.55□□□□□ -1.68
Nup98Q6PFD9 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC4.55□□□□□ -1.68
Nup98Q6PFD9 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.55□□□□□ -1.68
Nup98Q6PFD9 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.55□□□□□ -1.68
Nup98Q6PFD9 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC4.55□□□□□ -1.68
Nup98Q6PFD9 AC129202.3-201ENSMUST00000224413 733 ntBASIC4.55□□□□□ -1.68
Nup98Q6PFD9 Gm24147-201ENSMUST00000082763 144 ntBASIC4.55□□□□□ -1.68
Nup98Q6PFD9 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.55□□□□□ -1.68
Nup98Q6PFD9 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Nup98Q6PFD9 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Nup98Q6PFD9 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Nup98Q6PFD9 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Gm25977-201ENSMUST00000158697 85 ntBASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Gm26746-201ENSMUST00000181722 487 ntBASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Gm28186-201ENSMUST00000187447 679 ntBASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Gm7639-201ENSMUST00000212608 484 ntBASIC4.54□□□□□ -1.68
Nup98Q6PFD9 AC153971.2-201ENSMUST00000214553 777 ntBASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Gm19219-201ENSMUST00000215863 724 ntBASIC4.54□□□□□ -1.68
Nup98Q6PFD9 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Gm14886-201ENSMUST00000117208 2629 ntBASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Gm43883-201ENSMUST00000204002 3750 ntBASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Nup98Q6PFD9 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Gm14621-201ENSMUST00000117709 689 ntBASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Gm23540-201ENSMUST00000157543 164 ntBASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Gm22219-201ENSMUST00000157562 319 ntBASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Mir7047-201ENSMUST00000184595 64 ntBASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Gm18342-201ENSMUST00000186987 694 ntBASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Gm18352-201ENSMUST00000189113 902 ntBASIC4.53□□□□□ -1.68
Nup98Q6PFD9 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Gm12582-201ENSMUST00000030555 697 ntBASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Mir193a-201ENSMUST00000083461 66 ntBASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Nup98Q6PFD9 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Gm11829-201ENSMUST00000121003 282 ntBASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Gm24550-201ENSMUST00000158648 279 ntBASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Trbv8-201ENSMUST00000194020 285 ntBASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Nup98Q6PFD9 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Nup98Q6PFD9 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Nup98Q6PFD9 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Nup98Q6PFD9 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Nup98Q6PFD9 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Nup98Q6PFD9 Gm15060-201ENSMUST00000119550 948 ntBASIC4.52□□□□□ -1.69
Nup98Q6PFD9 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC4.52□□□□□ -1.69
Nup98Q6PFD9 Gm16566-201ENSMUST00000160387 910 ntBASIC4.52□□□□□ -1.69
Nup98Q6PFD9 Gm29668-201ENSMUST00000187802 315 ntBASIC4.52□□□□□ -1.69
Nup98Q6PFD9 Gm37560-201ENSMUST00000194289 1000 ntBASIC4.52□□□□□ -1.69
Nup98Q6PFD9 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Nup98Q6PFD9 Gm43039-201ENSMUST00000202883 963 ntBASIC4.52□□□□□ -1.69
Nup98Q6PFD9 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC4.52□□□□□ -1.69
Nup98Q6PFD9 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.52□□□□□ -1.69
Nup98Q6PFD9 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
Nup98Q6PFD9 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Nup98Q6PFD9 n-R5s166-201ENSMUST00000082898 121 ntBASIC4.52□□□□□ -1.69
Nup98Q6PFD9 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.52□□□□□ -1.69
Nup98Q6PFD9 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Nup98Q6PFD9 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.52□□□□□ -1.69
Nup98Q6PFD9 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Nup98Q6PFD9 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
Nup98Q6PFD9 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms