Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.03□□□□□ -1.6
Rnf220Q6PDX6 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC5.03□□□□□ -1.6
Rnf220Q6PDX6 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.03□□□□□ -1.6
Rnf220Q6PDX6 AV026068-216ENSMUST00000223874 328 ntBASIC5.03□□□□□ -1.6
Rnf220Q6PDX6 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Rnf220Q6PDX6 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Rnf220Q6PDX6 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Rnf220Q6PDX6 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.03□□□□□ -1.6
Rnf220Q6PDX6 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Rnf220Q6PDX6 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Rnf220Q6PDX6 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Rnf220Q6PDX6 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Rnf220Q6PDX6 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Rnf220Q6PDX6 Gm14806-201ENSMUST00000116606 2110 ntBASIC5.03□□□□□ -1.6
Rnf220Q6PDX6 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Rnf220Q6PDX6 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.03□□□□□ -1.6
Rnf220Q6PDX6 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Rnf220Q6PDX6 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Rnf220Q6PDX6 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm16436-201ENSMUST00000121510 1607 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm23311-201ENSMUST00000104152 134 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm23440-201ENSMUST00000104299 130 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm13728-201ENSMUST00000117471 400 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm11673-201ENSMUST00000117846 331 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm13785-201ENSMUST00000119099 690 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm11533-201ENSMUST00000120287 477 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm13973-201ENSMUST00000121371 894 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm12494-201ENSMUST00000121684 521 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm16331-201ENSMUST00000144274 498 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm22236-201ENSMUST00000157093 106 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm22867-201ENSMUST00000157499 109 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm25334-201ENSMUST00000158036 110 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm22841-201ENSMUST00000158443 62 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm29600-201ENSMUST00000188687 377 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm18296-201ENSMUST00000192475 783 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm43224-201ENSMUST00000201567 898 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm44125-201ENSMUST00000203068 448 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm18011-201ENSMUST00000203717 565 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm3257-201ENSMUST00000207217 675 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm5750-201ENSMUST00000218711 801 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 AC090496.1-201ENSMUST00000226020 260 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 AC156790.3-201ENSMUST00000226200 254 ntBASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Rnf220Q6PDX6 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 AC162910.1-201ENSMUST00000221219 1723 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Mir879-201ENSMUST00000104703 76 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm25507-201ENSMUST00000116981 144 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm13627-201ENSMUST00000119700 706 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm11742-201ENSMUST00000119903 233 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm11876-201ENSMUST00000120002 269 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm6446-201ENSMUST00000120604 818 ntBASIC5.01□□□□□ -1.61
Rnf220Q6PDX6 Gm15166-201ENSMUST00000120790 385 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms