Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm43028-201ENSMUST00000202561 481 ntBASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Gm44600-201ENSMUST00000208540 111 ntBASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 AL672194.1-201ENSMUST00000224841 603 ntBASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 AC117949.2-201ENSMUST00000225900 584 ntBASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Gm11200-201ENSMUST00000121698 448 ntBASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Gm27392-201ENSMUST00000185041 101 ntBASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 CT485612.3-201ENSMUST00000222179 408 ntBASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Mir30e-201ENSMUST00000083475 92 ntBASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC6.46□□□□□ -1.37
Ccdc88bQ4QRL3 Gm43751-201ENSMUST00000200275 3071 ntBASIC6.46□□□□□ -1.37
Ccdc88bQ4QRL3 AC153969.1-201ENSMUST00000214047 2605 ntBASIC6.46□□□□□ -1.38
Ccdc88bQ4QRL3 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.38
Ccdc88bQ4QRL3 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
Ccdc88bQ4QRL3 Gm45884-201ENSMUST00000209540 3416 ntBASIC6.46□□□□□ -1.38
Ccdc88bQ4QRL3 Gm44678-201ENSMUST00000207828 2775 ntBASIC6.46□□□□□ -1.38
Ccdc88bQ4QRL3 Gm11262-201ENSMUST00000119326 833 ntBASIC6.46□□□□□ -1.38
Ccdc88bQ4QRL3 Gm25436-201ENSMUST00000158275 145 ntBASIC6.46□□□□□ -1.38
Ccdc88bQ4QRL3 Gm16026-202ENSMUST00000159695 772 ntBASIC6.46□□□□□ -1.38
Ccdc88bQ4QRL3 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC6.46□□□□□ -1.38
Ccdc88bQ4QRL3 Mir7081-201ENSMUST00000184490 75 ntBASIC6.46□□□□□ -1.38
Ccdc88bQ4QRL3 Gm38020-201ENSMUST00000193066 4676 ntBASIC6.46□□□□□ -1.38
Ccdc88bQ4QRL3 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC6.46□□□□□ -1.38
Ccdc88bQ4QRL3 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc88bQ4QRL3 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC6.46□□□□□ -1.38
Ccdc88bQ4QRL3 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Ccdc88bQ4QRL3 Mir128-1-201ENSMUST00000083586 70 ntBASIC6.46□□□□□ -1.38
Ccdc88bQ4QRL3 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Ccdc88bQ4QRL3 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC6.46□□□□□ -1.38
Ccdc88bQ4QRL3 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 Gm38031-201ENSMUST00000191819 3015 ntBASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 Gm37781-201ENSMUST00000194773 3218 ntBASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 Gm10241-201ENSMUST00000117664 286 ntBASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 Gm13690-201ENSMUST00000118989 285 ntBASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 Gm26276-201ENSMUST00000157099 109 ntBASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 Trbv28-201ENSMUST00000192804 264 ntBASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 n-TSaga9-201ENSMUST00000197675 107 ntBASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 AC135377.1-201ENSMUST00000223692 463 ntBASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 BC023105-201ENSMUST00000073997 1227 ntBASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 Gm8473-201ENSMUST00000176697 1885 ntBASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 Gm37527-201ENSMUST00000192406 3547 ntBASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 Gm42770-201ENSMUST00000199657 4155 ntBASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc88bQ4QRL3 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC6.44□□□□□ -1.38
Ccdc88bQ4QRL3 Mir673-201ENSMUST00000102361 91 ntBASIC6.44□□□□□ -1.38
Ccdc88bQ4QRL3 Gm24067-201ENSMUST00000104514 85 ntBASIC6.44□□□□□ -1.38
Ccdc88bQ4QRL3 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc88bQ4QRL3 Defa-ps9-201ENSMUST00000118264 276 ntBASIC6.44□□□□□ -1.38
Ccdc88bQ4QRL3 Gm15403-201ENSMUST00000119343 1227 ntBASIC6.44□□□□□ -1.38
Ccdc88bQ4QRL3 Gm23602-201ENSMUST00000157258 132 ntBASIC6.44□□□□□ -1.38
Ccdc88bQ4QRL3 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Ccdc88bQ4QRL3 Gm3454-201ENSMUST00000185571 412 ntBASIC6.44□□□□□ -1.38
Ccdc88bQ4QRL3 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC6.44□□□□□ -1.38
Ccdc88bQ4QRL3 Gm38279-201ENSMUST00000194067 1131 ntBASIC6.44□□□□□ -1.38
Ccdc88bQ4QRL3 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Ccdc88bQ4QRL3 Gm44513-201ENSMUST00000206811 439 ntBASIC6.44□□□□□ -1.38
Ccdc88bQ4QRL3 Gm7119-201ENSMUST00000221345 695 ntBASIC6.44□□□□□ -1.38
Ccdc88bQ4QRL3 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC6.44□□□□□ -1.38
Ccdc88bQ4QRL3 AC154738.2-201ENSMUST00000227403 1110 ntBASIC6.44□□□□□ -1.38
Ccdc88bQ4QRL3 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Ccdc88bQ4QRL3 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc88bQ4QRL3 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Ccdc88bQ4QRL3 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Ccdc88bQ4QRL3 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Ccdc88bQ4QRL3 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccdc88bQ4QRL3 Gm28010-201ENSMUST00000179485 126 ntBASIC6.43□□□□□ -1.38
Ccdc88bQ4QRL3 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccdc88bQ4QRL3 Gm19637-201ENSMUST00000185933 579 ntBASIC6.43□□□□□ -1.38
Ccdc88bQ4QRL3 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC6.43□□□□□ -1.38
Ccdc88bQ4QRL3 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC6.43□□□□□ -1.38
Ccdc88bQ4QRL3 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccdc88bQ4QRL3 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC6.43□□□□□ -1.38
Ccdc88bQ4QRL3 Gm12582-201ENSMUST00000030555 697 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 143.6 ms