Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm11346-201ENSMUST00000118346 704 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm9078-201ENSMUST00000119126 617 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm6062-201ENSMUST00000120462 631 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm15719-201ENSMUST00000120619 635 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm16471-201ENSMUST00000121940 618 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm16373-201ENSMUST00000129517 303 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm23327-201ENSMUST00000157420 78 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm9027-201ENSMUST00000165914 661 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Mir7674-201ENSMUST00000184964 63 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm17981-201ENSMUST00000191109 739 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm19214-201ENSMUST00000191956 1083 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm18547-201ENSMUST00000192439 811 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm17967-201ENSMUST00000195319 647 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm43350-201ENSMUST00000196382 711 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm43856-201ENSMUST00000197004 369 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm18127-201ENSMUST00000208479 725 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 AC140299.2-201ENSMUST00000219546 1969 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm6056-201ENSMUST00000221253 488 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm7045-201ENSMUST00000221466 605 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 AC149294.7-201ENSMUST00000227475 1432 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Trim40Q3UWA4 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm13664-201ENSMUST00000117304 345 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm15670-201ENSMUST00000117740 447 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm12587-201ENSMUST00000120180 427 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm13080-201ENSMUST00000120556 420 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm24380-201ENSMUST00000122696 324 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm24751-201ENSMUST00000157844 102 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm25923-201ENSMUST00000158312 138 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm25598-201ENSMUST00000179031 107 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm29509-201ENSMUST00000185716 321 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm43945-201ENSMUST00000203595 754 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm44059-201ENSMUST00000204048 351 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm45032-201ENSMUST00000205375 520 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm2926-201ENSMUST00000205625 239 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm44615-201ENSMUST00000206548 358 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm17987-201ENSMUST00000206902 603 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm44954-201ENSMUST00000208513 227 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm40692-201ENSMUST00000220411 491 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm3338-201ENSMUST00000220982 269 ntBASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC4.07□□□□□ -1.76
Trim40Q3UWA4 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Trim40Q3UWA4 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms