Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Upf3aQ3ULJ3 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Upf3aQ3ULJ3 Mir690-201ENSMUST00000102110 109 ntBASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Gm23271-201ENSMUST00000104052 124 ntBASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Gm14385-201ENSMUST00000116315 876 ntBASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Gm11255-201ENSMUST00000120448 1180 ntBASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Gm12885-201ENSMUST00000122246 328 ntBASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Gm22084-201ENSMUST00000157585 105 ntBASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Gm16134-201ENSMUST00000161714 336 ntBASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Mir713-201ENSMUST00000178651 108 ntBASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Mir7047-201ENSMUST00000184595 64 ntBASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Gm29634-201ENSMUST00000188467 696 ntBASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Gm28699-201ENSMUST00000189193 696 ntBASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Gm43044-201ENSMUST00000198091 379 ntBASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 AC105407.3-201ENSMUST00000224161 648 ntBASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Gm23510-201ENSMUST00000083083 163 ntBASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Upf3aQ3ULJ3 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm9427-201ENSMUST00000116187 651 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm12261-201ENSMUST00000117499 645 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm11877-201ENSMUST00000118921 852 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm15267-201ENSMUST00000120888 464 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Clec2f-201ENSMUST00000121051 374 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm3757-201ENSMUST00000125878 675 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm24505-201ENSMUST00000157682 126 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm24636-201ENSMUST00000158673 288 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm10357-201ENSMUST00000159886 264 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm17711-201ENSMUST00000172028 237 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm37416-201ENSMUST00000193596 318 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm43649-201ENSMUST00000196596 391 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm42453-201ENSMUST00000200477 409 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm44765-201ENSMUST00000206927 601 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm44879-201ENSMUST00000207007 503 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm18377-201ENSMUST00000215141 607 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 AC142113.2-201ENSMUST00000217425 748 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 AC117949.2-201ENSMUST00000225900 584 ntBASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Upf3aQ3ULJ3 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm7219-201ENSMUST00000119619 297 ntBASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm11325-201ENSMUST00000119967 469 ntBASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Mup-ps17-201ENSMUST00000120723 218 ntBASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm12978-201ENSMUST00000121250 522 ntBASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm23959-201ENSMUST00000157208 324 ntBASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm25447-201ENSMUST00000158997 128 ntBASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm23365-201ENSMUST00000175019 125 ntBASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm25960-201ENSMUST00000175110 125 ntBASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm44453-201ENSMUST00000175161 126 ntBASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm25748-201ENSMUST00000175487 70 ntBASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm25195-201ENSMUST00000177656 126 ntBASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Upf3aQ3ULJ3 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms