Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm26354-201ENSMUST00000158221 129 ntBASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 Gm24224-201ENSMUST00000158828 258 ntBASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 Gm21742-201ENSMUST00000189352 548 ntBASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 Gm37996-201ENSMUST00000191859 367 ntBASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 Gm44023-201ENSMUST00000203710 469 ntBASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 Gm44852-201ENSMUST00000207950 369 ntBASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 Gm18043-201ENSMUST00000216741 739 ntBASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trafd1Q3UDK1 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Gm13664-201ENSMUST00000117304 345 ntBASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Gm10241-201ENSMUST00000117664 286 ntBASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Gm14750-201ENSMUST00000118262 516 ntBASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Gm14916-201ENSMUST00000121904 204 ntBASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Gm22514-201ENSMUST00000122547 308 ntBASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Gm21070-201ENSMUST00000182425 985 ntBASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Mir3620-201ENSMUST00000184710 61 ntBASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Gm27899-201ENSMUST00000184715 64 ntBASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Mir6418-201ENSMUST00000185075 115 ntBASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Gm28859-201ENSMUST00000186650 616 ntBASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Gm37300-201ENSMUST00000193327 280 ntBASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Gm17937-201ENSMUST00000197908 742 ntBASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Gm4734-201ENSMUST00000200117 777 ntBASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Gm18462-201ENSMUST00000208112 417 ntBASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.17□□□□□ -1.74
Trafd1Q3UDK1 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Gm15021-201ENSMUST00000117832 742 ntBASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Gm11698-201ENSMUST00000117948 455 ntBASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Gm9308-201ENSMUST00000119073 448 ntBASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Gm25669-201ENSMUST00000157699 112 ntBASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Gm26362-201ENSMUST00000158865 315 ntBASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Gm29228-201ENSMUST00000185489 418 ntBASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Gm43604-201ENSMUST00000199799 705 ntBASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Gm45458-201ENSMUST00000209900 522 ntBASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Gm45269-201ENSMUST00000210359 282 ntBASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Gm6863-201ENSMUST00000052882 636 ntBASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Gm12586-201ENSMUST00000117328 1316 ntBASIC4.16□□□□□ -1.74
Trafd1Q3UDK1 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms