Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 AL645546.1-201ENSMUST00000225001 189 ntBASIC2.69□□□□□ -1.98
PrkdcP97313 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PrkdcP97313 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
PrkdcP97313 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
PrkdcP97313 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PrkdcP97313 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
PrkdcP97313 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PrkdcP97313 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
PrkdcP97313 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
PrkdcP97313 Gm23964-201ENSMUST00000157966 107 ntBASIC2.69□□□□□ -1.98
PrkdcP97313 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
PrkdcP97313 Gm17966-201ENSMUST00000193453 594 ntBASIC2.69□□□□□ -1.98
PrkdcP97313 AC153794.2-201ENSMUST00000222650 550 ntBASIC2.69□□□□□ -1.98
PrkdcP97313 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC2.69□□□□□ -1.98
PrkdcP97313 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.69□□□□□ -1.98
PrkdcP97313 Snord35b-201ENSMUST00000082833 87 ntBASIC2.69□□□□□ -1.98
PrkdcP97313 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC2.69□□□□□ -1.98
PrkdcP97313 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PrkdcP97313 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.69□□□□□ -1.98
PrkdcP97313 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
PrkdcP97313 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PrkdcP97313 Gm42552-201ENSMUST00000196754 4497 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Gm13961-201ENSMUST00000119282 4772 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
PrkdcP97313 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PrkdcP97313 Gm42481-201ENSMUST00000196822 2178 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC2.68□□□□□ -1.98
PrkdcP97313 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC2.68□□□□□ -1.98
PrkdcP97313 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PrkdcP97313 Gm9931-201ENSMUST00000193584 1185 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
PrkdcP97313 Gm45157-201ENSMUST00000208729 401 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Gm8106-201ENSMUST00000213123 523 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
PrkdcP97313 AC107757.3-201ENSMUST00000226312 535 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PrkdcP97313 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PrkdcP97313 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
PrkdcP97313 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PrkdcP97313 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC2.68□□□□□ -1.98
PrkdcP97313 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PrkdcP97313 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PrkdcP97313 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
PrkdcP97313 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PrkdcP97313 Gm25308-201ENSMUST00000104171 158 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Gm14975-201ENSMUST00000118741 664 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Gm13787-201ENSMUST00000120422 168 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Gm22398-201ENSMUST00000174941 125 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Gm25731-201ENSMUST00000175167 125 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Gm26991-201ENSMUST00000180950 620 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Gm37300-201ENSMUST00000193327 280 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC2.68□□□□□ -1.98
PrkdcP97313 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC2.68□□□□□ -1.98
PrkdcP97313 Gm6562-201ENSMUST00000221903 464 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PrkdcP97313 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PrkdcP97313 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PrkdcP97313 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
PrkdcP97313 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PrkdcP97313 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
PrkdcP97313 Gm15994-201ENSMUST00000118029 402 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Gm6274-201ENSMUST00000118173 797 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Gm12564-201ENSMUST00000119860 321 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Gm16303-201ENSMUST00000161498 390 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Gm28282-201ENSMUST00000186072 186 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Gm3933-201ENSMUST00000195391 439 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.68□□□□□ -1.98
PrkdcP97313 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PrkdcP97313 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PrkdcP97313 Snord15a-201ENSMUST00000083888 148 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Gm38031-201ENSMUST00000191819 3015 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PrkdcP97313 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PrkdcP97313 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
PrkdcP97313 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
PrkdcP97313 Dcdc5-202ENSMUST00000122388 4957 ntBASIC2.68□□□□□ -1.98
PrkdcP97313 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
PrkdcP97313 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
PrkdcP97313 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PrkdcP97313 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC2.67□□□□□ -1.98
PrkdcP97313 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
PrkdcP97313 Gm24727-201ENSMUST00000158231 144 ntBASIC2.67□□□□□ -1.98
PrkdcP97313 Gm4322-201ENSMUST00000191094 336 ntBASIC2.67□□□□□ -1.98
PrkdcP97313 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC2.67□□□□□ -1.98
PrkdcP97313 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.67□□□□□ -1.98
PrkdcP97313 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.67□□□□□ -1.98
PrkdcP97313 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
PrkdcP97313 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
PrkdcP97313 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
PrkdcP97313 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
PrkdcP97313 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PrkdcP97313 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PrkdcP97313 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
PrkdcP97313 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PrkdcP97313 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
PrkdcP97313 Gm42870-201ENSMUST00000199355 3470 ntBASIC2.67□□□□□ -1.98
PrkdcP97313 Mir1195-201ENSMUST00000116818 98 ntBASIC2.67□□□□□ -1.98
PrkdcP97313 Gm15034-201ENSMUST00000120043 349 ntBASIC2.67□□□□□ -1.98
PrkdcP97313 Gm25436-201ENSMUST00000158275 145 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms