Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC6.01□□□□□ -1.45
Cux1P53564 Gm44824-201ENSMUST00000207021 229 ntBASIC6.01□□□□□ -1.45
Cux1P53564 Gm7639-201ENSMUST00000212608 484 ntBASIC6.01□□□□□ -1.45
Cux1P53564 AL772397.1-201ENSMUST00000216707 606 ntBASIC6.01□□□□□ -1.45
Cux1P53564 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC6.01□□□□□ -1.45
Cux1P53564 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Cux1P53564 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Cux1P53564 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cux1P53564 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cux1P53564 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cux1P53564 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cux1P53564 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC6.01□□□□□ -1.45
Cux1P53564 Gm8402-201ENSMUST00000118183 1770 ntBASIC6.01□□□□□ -1.45
Cux1P53564 Gm8383-201ENSMUST00000121179 1770 ntBASIC6.01□□□□□ -1.45
Cux1P53564 Gm37930-201ENSMUST00000194308 1886 ntBASIC6□□□□□ -1.45
Cux1P53564 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cux1P53564 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Cux1P53564 Gm8757-201ENSMUST00000119660 372 ntBASIC6□□□□□ -1.45
Cux1P53564 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cux1P53564 Gm24949-201ENSMUST00000183609 215 ntBASIC6□□□□□ -1.45
Cux1P53564 AC138718.1-201ENSMUST00000225947 1009 ntBASIC6□□□□□ -1.45
Cux1P53564 AC130673.2-201ENSMUST00000228091 797 ntBASIC6□□□□□ -1.45
Cux1P53564 Gm25480-201ENSMUST00000083217 133 ntBASIC6□□□□□ -1.45
Cux1P53564 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
Cux1P53564 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC6□□□□□ -1.45
Cux1P53564 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Cux1P53564 Gm43319-201ENSMUST00000198036 2270 ntBASIC6□□□□□ -1.45
Cux1P53564 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC6□□□□□ -1.45
Cux1P53564 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cux1P53564 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cux1P53564 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Cux1P53564 Gm37777-201ENSMUST00000195546 3366 ntBASIC6□□□□□ -1.45
Cux1P53564 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cux1P53564 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cux1P53564 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cux1P53564 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cux1P53564 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC6□□□□□ -1.45
Cux1P53564 Mir673-201ENSMUST00000102361 91 ntBASIC5.99□□□□□ -1.45
Cux1P53564 Gm11600-201ENSMUST00000119592 240 ntBASIC5.99□□□□□ -1.45
Cux1P53564 Defa-ps5-201ENSMUST00000121541 279 ntBASIC5.99□□□□□ -1.45
Cux1P53564 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC5.99□□□□□ -1.45
Cux1P53564 Gm23391-201ENSMUST00000157579 104 ntBASIC5.99□□□□□ -1.45
Cux1P53564 Gm42926-201ENSMUST00000200496 697 ntBASIC5.99□□□□□ -1.45
Cux1P53564 AC119573.1-201ENSMUST00000227960 757 ntBASIC5.99□□□□□ -1.45
Cux1P53564 AC155237.2-201ENSMUST00000228487 478 ntBASIC5.99□□□□□ -1.45
Cux1P53564 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cux1P53564 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC5.99□□□□□ -1.45
Cux1P53564 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC5.99□□□□□ -1.45
Cux1P53564 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cux1P53564 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cux1P53564 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Cux1P53564 Gm12683-201ENSMUST00000117528 415 ntBASIC5.99□□□□□ -1.45
Cux1P53564 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC5.99□□□□□ -1.45
Cux1P53564 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cux1P53564 Gm21638-201ENSMUST00000179473 836 ntBASIC5.99□□□□□ -1.45
Cux1P53564 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC5.99□□□□□ -1.45
Cux1P53564 Mir7062-201ENSMUST00000185038 66 ntBASIC5.99□□□□□ -1.45
Cux1P53564 Gm29668-201ENSMUST00000187802 315 ntBASIC5.99□□□□□ -1.45
Cux1P53564 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cux1P53564 Gm18403-201ENSMUST00000192907 529 ntBASIC5.99□□□□□ -1.45
Cux1P53564 Gm37104-201ENSMUST00000193278 196 ntBASIC5.99□□□□□ -1.45
Cux1P53564 Gm44355-201ENSMUST00000200417 104 ntBASIC5.99□□□□□ -1.45
Cux1P53564 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cux1P53564 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC5.99□□□□□ -1.45
Cux1P53564 Gm39197-201ENSMUST00000212069 457 ntBASIC5.99□□□□□ -1.45
Cux1P53564 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC5.99□□□□□ -1.45
Cux1P53564 Mir133a-2-201ENSMUST00000083526 104 ntBASIC5.99□□□□□ -1.45
Cux1P53564 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.99□□□□□ -1.45
Cux1P53564 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
Cux1P53564 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.98□□□□□ -1.45
Cux1P53564 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cux1P53564 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
Cux1P53564 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Cux1P53564 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cux1P53564 Gm25272-201ENSMUST00000104293 128 ntBASIC5.98□□□□□ -1.45
Cux1P53564 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC5.98□□□□□ -1.45
Cux1P53564 Gm8023-201ENSMUST00000195298 903 ntBASIC5.98□□□□□ -1.45
Cux1P53564 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC5.98□□□□□ -1.45
Cux1P53564 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC5.98□□□□□ -1.45
Cux1P53564 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Cux1P53564 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Cux1P53564 Gm43341-201ENSMUST00000200104 1308 ntBASIC5.98□□□□□ -1.45
Cux1P53564 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Cux1P53564 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Cux1P53564 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cux1P53564 Gm43883-201ENSMUST00000204002 3750 ntBASIC5.97□□□□□ -1.45
Cux1P53564 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cux1P53564 Gm22590-201ENSMUST00000104247 128 ntBASIC5.97□□□□□ -1.45
Cux1P53564 Gm24008-201ENSMUST00000157733 138 ntBASIC5.97□□□□□ -1.45
Cux1P53564 Gm25860-201ENSMUST00000158252 126 ntBASIC5.97□□□□□ -1.45
Cux1P53564 Gm29576-201ENSMUST00000188020 678 ntBASIC5.97□□□□□ -1.45
Cux1P53564 Gm28354-201ENSMUST00000190904 678 ntBASIC5.97□□□□□ -1.45
Cux1P53564 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cux1P53564 AV026068-237ENSMUST00000226075 572 ntBASIC5.97□□□□□ -1.45
Cux1P53564 AC134864.1-201ENSMUST00000226326 511 ntBASIC5.97□□□□□ -1.45
Cux1P53564 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cux1P53564 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cux1P53564 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Cux1P53564 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cux1P53564 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms