Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm29793-201ENSMUST00000202874 460 ntBASIC6.55□□□□□ -1.36
Rfx1P48377 Gm44580-201ENSMUST00000206333 877 ntBASIC6.55□□□□□ -1.36
Rfx1P48377 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.55□□□□□ -1.36
Rfx1P48377 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC6.55□□□□□ -1.36
Rfx1P48377 Gm18488-201ENSMUST00000215082 364 ntBASIC6.55□□□□□ -1.36
Rfx1P48377 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Rfx1P48377 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC6.55□□□□□ -1.36
Rfx1P48377 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC6.55□□□□□ -1.36
Rfx1P48377 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rfx1P48377 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC6.55□□□□□ -1.36
Rfx1P48377 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Rfx1P48377 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Rfx1P48377 Gm37834-201ENSMUST00000194517 3035 ntBASIC6.55□□□□□ -1.36
Rfx1P48377 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Rfx1P48377 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Rfx1P48377 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Rfx1P48377 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Rfx1P48377 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rfx1P48377 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Rfx1P48377 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
Rfx1P48377 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx1P48377 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC6.54□□□□□ -1.36
Rfx1P48377 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Rfx1P48377 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
Rfx1P48377 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Rfx1P48377 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC6.54□□□□□ -1.36
Rfx1P48377 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Rfx1P48377 Gm7071-201ENSMUST00000120458 462 ntBASIC6.54□□□□□ -1.36
Rfx1P48377 Gm13669-201ENSMUST00000122366 457 ntBASIC6.54□□□□□ -1.36
Rfx1P48377 Gm11254-201ENSMUST00000122368 653 ntBASIC6.54□□□□□ -1.36
Rfx1P48377 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC6.54□□□□□ -1.36
Rfx1P48377 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC6.54□□□□□ -1.36
Rfx1P48377 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx1P48377 Gm25439-201ENSMUST00000158280 131 ntBASIC6.54□□□□□ -1.36
Rfx1P48377 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx1P48377 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx1P48377 Gm20415-201ENSMUST00000172877 423 ntBASIC6.54□□□□□ -1.36
Rfx1P48377 Gm8941-201ENSMUST00000181451 899 ntBASIC6.54□□□□□ -1.36
Rfx1P48377 Mir7093-201ENSMUST00000184195 101 ntBASIC6.54□□□□□ -1.36
Rfx1P48377 Gm27588-201ENSMUST00000185096 263 ntBASIC6.54□□□□□ -1.36
Rfx1P48377 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx1P48377 Gm9227-201ENSMUST00000194733 566 ntBASIC6.54□□□□□ -1.36
Rfx1P48377 Igkv2-107-201ENSMUST00000196000 313 ntBASIC6.54□□□□□ -1.36
Rfx1P48377 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC6.54□□□□□ -1.36
Rfx1P48377 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.54□□□□□ -1.36
Rfx1P48377 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC6.54□□□□□ -1.36
Rfx1P48377 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC6.54□□□□□ -1.36
Rfx1P48377 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC6.54□□□□□ -1.36
Rfx1P48377 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.54□□□□□ -1.36
Rfx1P48377 AC157085.1-201ENSMUST00000216343 162 ntBASIC6.54□□□□□ -1.36
Rfx1P48377 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC6.54□□□□□ -1.36
Rfx1P48377 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.54□□□□□ -1.36
Rfx1P48377 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC6.54□□□□□ -1.36
Rfx1P48377 Gm5045-201ENSMUST00000027054 810 ntBASIC6.54□□□□□ -1.36
Rfx1P48377 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx1P48377 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Rfx1P48377 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx1P48377 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx1P48377 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Rfx1P48377 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Rfx1P48377 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Rfx1P48377 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx1P48377 Gm18716-201ENSMUST00000204507 1603 ntBASIC6.54□□□□□ -1.36
Rfx1P48377 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Rfx1P48377 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx1P48377 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Rfx1P48377 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx1P48377 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx1P48377 Gm37527-201ENSMUST00000192406 3547 ntBASIC6.53□□□□□ -1.36
Rfx1P48377 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Rfx1P48377 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx1P48377 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx1P48377 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx1P48377 AC116726.1-201ENSMUST00000215028 3497 ntBASIC6.53□□□□□ -1.36
Rfx1P48377 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Rfx1P48377 Abcc2-202ENSMUST00000099413 1926 ntBASIC6.53□□□□□ -1.36
Rfx1P48377 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx1P48377 Gm24273-201ENSMUST00000102332 164 ntBASIC6.53□□□□□ -1.36
Rfx1P48377 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Rfx1P48377 Gm22953-201ENSMUST00000116724 101 ntBASIC6.53□□□□□ -1.36
Rfx1P48377 Gm11219-201ENSMUST00000118565 358 ntBASIC6.53□□□□□ -1.36
Rfx1P48377 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx1P48377 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC6.53□□□□□ -1.36
Rfx1P48377 Gm22867-201ENSMUST00000157499 109 ntBASIC6.53□□□□□ -1.36
Rfx1P48377 Gm23538-201ENSMUST00000157535 101 ntBASIC6.53□□□□□ -1.36
Rfx1P48377 Gm25706-201ENSMUST00000157828 247 ntBASIC6.53□□□□□ -1.36
Rfx1P48377 Gm24860-201ENSMUST00000158457 276 ntBASIC6.53□□□□□ -1.36
Rfx1P48377 Gm10087-201ENSMUST00000167650 330 ntBASIC6.53□□□□□ -1.36
Rfx1P48377 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC6.53□□□□□ -1.36
Rfx1P48377 Gm17919-201ENSMUST00000173344 312 ntBASIC6.53□□□□□ -1.36
Rfx1P48377 Gm27998-201ENSMUST00000184902 361 ntBASIC6.53□□□□□ -1.36
Rfx1P48377 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.53□□□□□ -1.36
Rfx1P48377 Gm4501-201ENSMUST00000207330 551 ntBASIC6.53□□□□□ -1.36
Rfx1P48377 Gm4558-201ENSMUST00000207886 521 ntBASIC6.53□□□□□ -1.36
Rfx1P48377 Gm4528-201ENSMUST00000207905 551 ntBASIC6.53□□□□□ -1.36
Rfx1P48377 Gm3690-201ENSMUST00000211341 262 ntBASIC6.53□□□□□ -1.36
Rfx1P48377 AC125484.1-201ENSMUST00000223218 234 ntBASIC6.53□□□□□ -1.36
Rfx1P48377 AC102575.1-201ENSMUST00000225348 547 ntBASIC6.53□□□□□ -1.36
Rfx1P48377 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx1P48377 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms