Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 AC122295.1-201ENSMUST00000223476 388 ntBASIC3.92□□□□□ -1.78
Cdx2P43241 AC126253.2-201ENSMUST00000226518 205 ntBASIC3.92□□□□□ -1.78
Cdx2P43241 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Cdx2P43241 Gm23443-201ENSMUST00000082916 128 ntBASIC3.92□□□□□ -1.78
Cdx2P43241 Gm22868-201ENSMUST00000083955 164 ntBASIC3.92□□□□□ -1.78
Cdx2P43241 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Cdx2P43241 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
Cdx2P43241 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.92□□□□□ -1.78
Cdx2P43241 Gm45804-201ENSMUST00000212137 3435 ntBASIC3.92□□□□□ -1.78
Cdx2P43241 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Cdx2P43241 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Cdx2P43241 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Cdx2P43241 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Cdx2P43241 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Cdx2P43241 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC3.91□□□□□ -1.78
Cdx2P43241 Gm25764-201ENSMUST00000104092 134 ntBASIC3.91□□□□□ -1.78
Cdx2P43241 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Cdx2P43241 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC3.91□□□□□ -1.78
Cdx2P43241 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Cdx2P43241 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.91□□□□□ -1.78
Cdx2P43241 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Cdx2P43241 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Cdx2P43241 Gm7241-201ENSMUST00000159853 357 ntBASIC3.91□□□□□ -1.78
Cdx2P43241 Gm5258-201ENSMUST00000165437 327 ntBASIC3.91□□□□□ -1.78
Cdx2P43241 Gm2427-201ENSMUST00000189121 881 ntBASIC3.91□□□□□ -1.78
Cdx2P43241 AC122464.1-201ENSMUST00000202789 770 ntBASIC3.91□□□□□ -1.78
Cdx2P43241 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.91□□□□□ -1.78
Cdx2P43241 Gm45553-201ENSMUST00000209929 507 ntBASIC3.91□□□□□ -1.78
Cdx2P43241 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Cdx2P43241 AC158807.1-201ENSMUST00000217959 187 ntBASIC3.91□□□□□ -1.78
Cdx2P43241 AC152062.1-201ENSMUST00000218129 386 ntBASIC3.91□□□□□ -1.78
Cdx2P43241 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.91□□□□□ -1.78
Cdx2P43241 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.91□□□□□ -1.78
Cdx2P43241 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.91□□□□□ -1.78
Cdx2P43241 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Cdx2P43241 Olfr192-201ENSMUST00000080251 925 ntBASIC3.91□□□□□ -1.78
Cdx2P43241 Mir202-201ENSMUST00000083568 72 ntBASIC3.91□□□□□ -1.78
Cdx2P43241 Gm7381-201ENSMUST00000098958 300 ntBASIC3.91□□□□□ -1.78
Cdx2P43241 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Cdx2P43241 Gm5155-201ENSMUST00000072381 2841 ntBASIC3.91□□□□□ -1.78
Cdx2P43241 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Cdx2P43241 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Cdx2P43241 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Cdx2P43241 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Cdx2P43241 Gm45131-201ENSMUST00000208051 2582 ntBASIC3.91□□□□□ -1.78
Cdx2P43241 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Cdx2P43241 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Cdx2P43241 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Cdx2P43241 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Cdx2P43241 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Cdx2P43241 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Cdx2P43241 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Cdx2P43241 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC3.9□□□□□ -1.78
Cdx2P43241 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Cdx2P43241 Gm42455-201ENSMUST00000199761 2736 ntBASIC3.9□□□□□ -1.78
Cdx2P43241 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC3.9□□□□□ -1.78
Cdx2P43241 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Cdx2P43241 Gm11432-201ENSMUST00000117334 231 ntBASIC3.9□□□□□ -1.79
Cdx2P43241 Gm13386-201ENSMUST00000117677 124 ntBASIC3.9□□□□□ -1.79
Cdx2P43241 Gm12465-201ENSMUST00000118591 300 ntBASIC3.9□□□□□ -1.79
Cdx2P43241 Gm12978-201ENSMUST00000121250 522 ntBASIC3.9□□□□□ -1.79
Cdx2P43241 Gm7618-201ENSMUST00000121643 171 ntBASIC3.9□□□□□ -1.79
Cdx2P43241 Gm11403-201ENSMUST00000122195 369 ntBASIC3.9□□□□□ -1.79
Cdx2P43241 Gm23865-201ENSMUST00000157723 97 ntBASIC3.9□□□□□ -1.79
Cdx2P43241 Gm22116-201ENSMUST00000158791 141 ntBASIC3.9□□□□□ -1.79
Cdx2P43241 Gm22859-201ENSMUST00000174978 122 ntBASIC3.9□□□□□ -1.79
Cdx2P43241 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Cdx2P43241 Trbv28-201ENSMUST00000192804 264 ntBASIC3.9□□□□□ -1.79
Cdx2P43241 Gm37097-201ENSMUST00000193676 336 ntBASIC3.9□□□□□ -1.79
Cdx2P43241 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC3.9□□□□□ -1.79
Cdx2P43241 Gm4644-201ENSMUST00000197587 400 ntBASIC3.9□□□□□ -1.79
Cdx2P43241 Gm18429-201ENSMUST00000198707 421 ntBASIC3.9□□□□□ -1.79
Cdx2P43241 Gm19596-201ENSMUST00000203685 739 ntBASIC3.9□□□□□ -1.79
Cdx2P43241 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Cdx2P43241 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.9□□□□□ -1.79
Cdx2P43241 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC3.9□□□□□ -1.79
Cdx2P43241 AC174776.1-201ENSMUST00000221509 405 ntBASIC3.9□□□□□ -1.79
Cdx2P43241 AC174776.2-201ENSMUST00000222561 405 ntBASIC3.9□□□□□ -1.79
Cdx2P43241 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC3.9□□□□□ -1.79
Cdx2P43241 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Cdx2P43241 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Cdx2P43241 Gm5265-201ENSMUST00000076828 342 ntBASIC3.9□□□□□ -1.79
Cdx2P43241 Gm25481-201ENSMUST00000083221 158 ntBASIC3.9□□□□□ -1.79
Cdx2P43241 Mir370-201ENSMUST00000083499 79 ntBASIC3.9□□□□□ -1.79
Cdx2P43241 Gm10704-201ENSMUST00000098952 730 ntBASIC3.9□□□□□ -1.79
Cdx2P43241 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Cdx2P43241 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC3.9□□□□□ -1.79
Cdx2P43241 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC3.9□□□□□ -1.79
Cdx2P43241 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Cdx2P43241 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC3.9□□□□□ -1.79
Cdx2P43241 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Cdx2P43241 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Cdx2P43241 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC3.89□□□□□ -1.79
Cdx2P43241 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cdx2P43241 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cdx2P43241 Gm12931-201ENSMUST00000117046 324 ntBASIC3.89□□□□□ -1.79
Cdx2P43241 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC3.89□□□□□ -1.79
Cdx2P43241 Gm6079-201ENSMUST00000121356 404 ntBASIC3.89□□□□□ -1.79
Cdx2P43241 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Cdx2P43241 Gm23082-201ENSMUST00000157852 133 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms