Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Traf1P39428 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Traf1P39428 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Traf1P39428 Gm25647-201ENSMUST00000101832 78 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm25823-201ENSMUST00000101995 78 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm23178-201ENSMUST00000116782 95 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm14986-201ENSMUST00000121262 1002 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Traf1P39428 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Traf1P39428 Gm16373-201ENSMUST00000129517 303 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Traf1P39428 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Traf1P39428 Gm16250-201ENSMUST00000148974 256 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm23496-201ENSMUST00000157741 248 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm22637-201ENSMUST00000158144 283 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm24002-201ENSMUST00000158456 104 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Traf1P39428 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Traf1P39428 Gm18560-201ENSMUST00000173463 1123 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm19807-201ENSMUST00000173971 667 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm24220-201ENSMUST00000177753 79 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm25988-201ENSMUST00000177759 79 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm23471-201ENSMUST00000177886 79 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm26488-201ENSMUST00000178225 79 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm23449-201ENSMUST00000179208 79 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm25221-201ENSMUST00000180051 79 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.15□□□□□ -1.59
Traf1P39428 Gm37272-201ENSMUST00000193401 488 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm37629-201ENSMUST00000193635 1050 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm43370-201ENSMUST00000196437 284 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm43304-201ENSMUST00000196803 326 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm36382-201ENSMUST00000198892 541 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm43345-201ENSMUST00000199484 269 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm4734-201ENSMUST00000200117 777 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm45458-201ENSMUST00000209900 522 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm45498-201ENSMUST00000210346 283 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.59
Traf1P39428 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Traf1P39428 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Traf1P39428 AC153975.1-201ENSMUST00000220087 926 ntBASIC5.15□□□□□ -1.59
Traf1P39428 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC5.15□□□□□ -1.59
Traf1P39428 AC154576.1-201ENSMUST00000225864 563 ntBASIC5.15□□□□□ -1.59
Traf1P39428 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.15□□□□□ -1.59
Traf1P39428 CT025525.3-201ENSMUST00000228858 366 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Traf1P39428 Gm23677-201ENSMUST00000083156 104 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Traf1P39428 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Traf1P39428 Gm43668-201ENSMUST00000197014 5342 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Traf1P39428 Gm3623-201ENSMUST00000173643 2747 ntBASIC5.15□□□□□ -1.59
Traf1P39428 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC5.15□□□□□ -1.59
Traf1P39428 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
Traf1P39428 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Traf1P39428 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Traf1P39428 Gm26367-201ENSMUST00000104165 132 ntBASIC5.14□□□□□ -1.59
Traf1P39428 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC5.14□□□□□ -1.59
Traf1P39428 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC5.14□□□□□ -1.59
Traf1P39428 Amd-ps1-201ENSMUST00000120127 994 ntBASIC5.14□□□□□ -1.59
Traf1P39428 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC5.14□□□□□ -1.59
Traf1P39428 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Traf1P39428 Gm23905-201ENSMUST00000157568 109 ntBASIC5.14□□□□□ -1.59
Traf1P39428 Gm5258-201ENSMUST00000165437 327 ntBASIC5.14□□□□□ -1.59
Traf1P39428 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC5.14□□□□□ -1.59
Traf1P39428 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Traf1P39428 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Traf1P39428 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Traf1P39428 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC5.14□□□□□ -1.59
Traf1P39428 Gm27155-201ENSMUST00000183716 898 ntBASIC5.14□□□□□ -1.59
Traf1P39428 Gm28011-201ENSMUST00000184097 175 ntBASIC5.14□□□□□ -1.59
Traf1P39428 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC5.14□□□□□ -1.59
Traf1P39428 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC5.14□□□□□ -1.59
Traf1P39428 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.14□□□□□ -1.59
Traf1P39428 Gm17953-201ENSMUST00000192061 667 ntBASIC5.14□□□□□ -1.59
Traf1P39428 Gm43037-201ENSMUST00000196808 250 ntBASIC5.14□□□□□ -1.59
Traf1P39428 Gm43005-201ENSMUST00000199015 648 ntBASIC5.14□□□□□ -1.59
Traf1P39428 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.14□□□□□ -1.59
Traf1P39428 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Traf1P39428 Gm5876-201ENSMUST00000203735 243 ntBASIC5.14□□□□□ -1.59
Traf1P39428 Gm18462-201ENSMUST00000208112 417 ntBASIC5.14□□□□□ -1.59
Traf1P39428 Gm8679-201ENSMUST00000210651 1036 ntBASIC5.14□□□□□ -1.59
Traf1P39428 Gm18320-201ENSMUST00000211304 595 ntBASIC5.14□□□□□ -1.59
Traf1P39428 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC5.14□□□□□ -1.59
Traf1P39428 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC5.14□□□□□ -1.59
Traf1P39428 AC192088.2-201ENSMUST00000227590 411 ntBASIC5.14□□□□□ -1.59
Traf1P39428 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Traf1P39428 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Traf1P39428 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Traf1P39428 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Traf1P39428 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC5.14□□□□□ -1.59
Traf1P39428 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Traf1P39428 Gm15304-201ENSMUST00000122150 2640 ntBASIC5.14□□□□□ -1.59
Traf1P39428 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Traf1P39428 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Traf1P39428 Gm43705-201ENSMUST00000195958 3717 ntBASIC5.14□□□□□ -1.59
Traf1P39428 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Traf1P39428 Gm42552-201ENSMUST00000196754 4497 ntBASIC5.14□□□□□ -1.59
Traf1P39428 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms