Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.11□□□□□ -1.59
LdlrP35951 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC5.11□□□□□ -1.59
LdlrP35951 Gm43472-201ENSMUST00000200175 154 ntBASIC5.11□□□□□ -1.59
LdlrP35951 Gm43368-201ENSMUST00000200638 409 ntBASIC5.11□□□□□ -1.59
LdlrP35951 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
LdlrP35951 Gm18468-201ENSMUST00000207321 369 ntBASIC5.11□□□□□ -1.59
LdlrP35951 Gm18470-201ENSMUST00000207467 420 ntBASIC5.11□□□□□ -1.59
LdlrP35951 Gm18465-201ENSMUST00000207468 369 ntBASIC5.11□□□□□ -1.59
LdlrP35951 Gm18464-201ENSMUST00000207803 420 ntBASIC5.11□□□□□ -1.59
LdlrP35951 Gm18458-201ENSMUST00000207908 369 ntBASIC5.11□□□□□ -1.59
LdlrP35951 Gm18461-201ENSMUST00000208421 420 ntBASIC5.11□□□□□ -1.59
LdlrP35951 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.11□□□□□ -1.59
LdlrP35951 Gm21041-201ENSMUST00000214829 823 ntBASIC5.11□□□□□ -1.59
LdlrP35951 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.11□□□□□ -1.59
LdlrP35951 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.11□□□□□ -1.59
LdlrP35951 AC154371.1-201ENSMUST00000226600 412 ntBASIC5.11□□□□□ -1.59
LdlrP35951 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.11□□□□□ -1.59
LdlrP35951 CT030238.4-201ENSMUST00000228579 801 ntBASIC5.11□□□□□ -1.59
LdlrP35951 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LdlrP35951 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LdlrP35951 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC5.11□□□□□ -1.59
LdlrP35951 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LdlrP35951 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LdlrP35951 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LdlrP35951 Mir449a-201ENSMUST00000083641 91 ntBASIC5.11□□□□□ -1.59
LdlrP35951 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LdlrP35951 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
LdlrP35951 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LdlrP35951 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LdlrP35951 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LdlrP35951 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LdlrP35951 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
LdlrP35951 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LdlrP35951 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LdlrP35951 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LdlrP35951 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LdlrP35951 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
LdlrP35951 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LdlrP35951 Snord70-201ENSMUST00000104157 87 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
LdlrP35951 Gm11869-201ENSMUST00000118701 329 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Gm11943-201ENSMUST00000119473 327 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Gm11742-201ENSMUST00000119903 233 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Gm13787-201ENSMUST00000120422 168 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Gm15480-201ENSMUST00000120442 519 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Gm16428-201ENSMUST00000121193 723 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Gm13162-201ENSMUST00000121481 454 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Gm11692-201ENSMUST00000122121 902 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LdlrP35951 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.1□□□□□ -1.59
LdlrP35951 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC5.1□□□□□ -1.59
LdlrP35951 Gm23591-201ENSMUST00000157663 286 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Gm23318-201ENSMUST00000158000 108 ntBASIC5.1□□□□□ -1.59
LdlrP35951 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.1□□□□□ -1.59
LdlrP35951 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LdlrP35951 Gm26092-201ENSMUST00000179798 97 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Mir669a-1-201ENSMUST00000180238 97 ntBASIC5.1□□□□□ -1.59
LdlrP35951 S100a11-ps-201ENSMUST00000181735 306 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC5.1□□□□□ -1.59
LdlrP35951 Gm27543-201ENSMUST00000183562 177 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
LdlrP35951 Gm18900-201ENSMUST00000193218 584 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Gm33952-201ENSMUST00000197795 408 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC5.1□□□□□ -1.59
LdlrP35951 Gm18327-201ENSMUST00000202426 830 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC5.1□□□□□ -1.59
LdlrP35951 Gm19232-201ENSMUST00000211621 652 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
LdlrP35951 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.1□□□□□ -1.59
LdlrP35951 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC5.1□□□□□ -1.59
LdlrP35951 AC116589.1-201ENSMUST00000220634 327 ntBASIC5.1□□□□□ -1.59
LdlrP35951 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.1□□□□□ -1.59
LdlrP35951 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.1□□□□□ -1.59
LdlrP35951 AC168062.2-201ENSMUST00000228907 422 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LdlrP35951 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LdlrP35951 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LdlrP35951 Gm23846-201ENSMUST00000083835 107 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Gm9386-201ENSMUST00000095195 381 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LdlrP35951 Gm10794-201ENSMUST00000099624 207 ntBASIC5.1□□□□□ -1.59
LdlrP35951 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LdlrP35951 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.1□□□□□ -1.59
LdlrP35951 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
LdlrP35951 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.1□□□□□ -1.59
LdlrP35951 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LdlrP35951 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
LdlrP35951 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.09□□□□□ -1.59
LdlrP35951 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.09□□□□□ -1.59
LdlrP35951 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LdlrP35951 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.09□□□□□ -1.59
LdlrP35951 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LdlrP35951 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
LdlrP35951 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
LdlrP35951 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LdlrP35951 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LdlrP35951 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LdlrP35951 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms