Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Lire1P11260 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Lire1P11260 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Lire1P11260 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Lire1P11260 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Lire1P11260 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Lire1P11260 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Lire1P11260 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Lire1P11260 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Lire1P11260 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Lire1P11260 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Lire1P11260 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Lire1P11260 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Lire1P11260 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Lire1P11260 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Lire1P11260 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.59□□□□□ -1.67
Lire1P11260 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC4.59□□□□□ -1.67
Lire1P11260 Gm23957-201ENSMUST00000157209 90 ntBASIC4.59□□□□□ -1.67
Lire1P11260 Gm23534-201ENSMUST00000157539 97 ntBASIC4.59□□□□□ -1.67
Lire1P11260 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Lire1P11260 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC4.59□□□□□ -1.67
Lire1P11260 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Lire1P11260 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Lire1P11260 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Lire1P11260 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Lire1P11260 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Lire1P11260 Gm2092-201ENSMUST00000178887 639 ntBASIC4.59□□□□□ -1.67
Lire1P11260 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Lire1P11260 Gm2759-201ENSMUST00000179938 639 ntBASIC4.59□□□□□ -1.67
Lire1P11260 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Lire1P11260 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC4.59□□□□□ -1.67
Lire1P11260 Gm42526-201ENSMUST00000198956 393 ntBASIC4.59□□□□□ -1.67
Lire1P11260 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.59□□□□□ -1.67
Lire1P11260 Gm7721-201ENSMUST00000200446 546 ntBASIC4.59□□□□□ -1.67
Lire1P11260 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC4.59□□□□□ -1.67
Lire1P11260 Gm34224-201ENSMUST00000204606 364 ntBASIC4.59□□□□□ -1.67
Lire1P11260 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.59□□□□□ -1.67
Lire1P11260 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Lire1P11260 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.59□□□□□ -1.67
Lire1P11260 Gm46369-201ENSMUST00000221577 401 ntBASIC4.59□□□□□ -1.67
Lire1P11260 AC154441.1-201ENSMUST00000223653 1006 ntBASIC4.59□□□□□ -1.67
Lire1P11260 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Lire1P11260 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Lire1P11260 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
Lire1P11260 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Lire1P11260 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Lire1P11260 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.59□□□□□ -1.67
Lire1P11260 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.59□□□□□ -1.67
Lire1P11260 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.58□□□□□ -1.68
Lire1P11260 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Lire1P11260 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Lire1P11260 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.58□□□□□ -1.68
Lire1P11260 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Lire1P11260 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Lire1P11260 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Lire1P11260 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Lire1P11260 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Lire1P11260 AC134860.3-201ENSMUST00000223564 1300 ntBASIC4.58□□□□□ -1.68
Lire1P11260 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Lire1P11260 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Lire1P11260 Gm24235-201ENSMUST00000104319 129 ntBASIC4.58□□□□□ -1.68
Lire1P11260 Gm14050-201ENSMUST00000117052 346 ntBASIC4.58□□□□□ -1.68
Lire1P11260 Gm14711-201ENSMUST00000117056 217 ntBASIC4.58□□□□□ -1.68
Lire1P11260 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC4.58□□□□□ -1.68
Lire1P11260 Gm13359-201ENSMUST00000119000 695 ntBASIC4.58□□□□□ -1.68
Lire1P11260 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Lire1P11260 Gm12564-201ENSMUST00000119860 321 ntBASIC4.58□□□□□ -1.68
Lire1P11260 Gm12422-201ENSMUST00000121431 302 ntBASIC4.58□□□□□ -1.68
Lire1P11260 Gm22208-201ENSMUST00000122658 110 ntBASIC4.58□□□□□ -1.68
Lire1P11260 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC4.58□□□□□ -1.68
Lire1P11260 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Lire1P11260 Gm7316-201ENSMUST00000165395 445 ntBASIC4.58□□□□□ -1.68
Lire1P11260 Rab26os-201ENSMUST00000176215 477 ntBASIC4.58□□□□□ -1.68
Lire1P11260 Gm21809-201ENSMUST00000178495 468 ntBASIC4.58□□□□□ -1.68
Lire1P11260 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Lire1P11260 Gm17412-201ENSMUST00000179261 468 ntBASIC4.58□□□□□ -1.68
Lire1P11260 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Lire1P11260 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Lire1P11260 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Lire1P11260 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.58□□□□□ -1.68
Lire1P11260 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Lire1P11260 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Lire1P11260 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC4.58□□□□□ -1.68
Lire1P11260 Gm3933-201ENSMUST00000195391 439 ntBASIC4.58□□□□□ -1.68
Lire1P11260 Gm43214-201ENSMUST00000199242 352 ntBASIC4.58□□□□□ -1.68
Lire1P11260 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.58□□□□□ -1.68
Lire1P11260 Gm5358-201ENSMUST00000212814 353 ntBASIC4.58□□□□□ -1.68
Lire1P11260 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.58□□□□□ -1.68
Lire1P11260 Gm18225-201ENSMUST00000216708 742 ntBASIC4.58□□□□□ -1.68
Lire1P11260 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.58□□□□□ -1.68
Lire1P11260 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.58□□□□□ -1.68
Lire1P11260 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
Lire1P11260 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.58□□□□□ -1.68
Lire1P11260 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Lire1P11260 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Lire1P11260 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Lire1P11260 Gm10115-201ENSMUST00000076071 1228 ntBASIC4.58□□□□□ -1.68
Lire1P11260 Gm24763-201ENSMUST00000083688 190 ntBASIC4.58□□□□□ -1.68
Lire1P11260 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Lire1P11260 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms