Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Gm22472-201ENSMUST00000104115 134 ntBASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Gm24788-201ENSMUST00000104283 156 ntBASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Snora64-201ENSMUST00000104521 134 ntBASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Gm24380-201ENSMUST00000122696 324 ntBASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Gm25456-201ENSMUST00000157952 109 ntBASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Gm22519-201ENSMUST00000158270 178 ntBASIC4.5□□□□□ -1.69
Chmp6P0C0A3 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Chmp6P0C0A3 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Gm10074-201ENSMUST00000174543 249 ntBASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Gm27899-201ENSMUST00000184715 64 ntBASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Gm28615-201ENSMUST00000187527 482 ntBASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Gm29634-201ENSMUST00000188467 696 ntBASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Gm28699-201ENSMUST00000189193 696 ntBASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Gm43856-201ENSMUST00000197004 369 ntBASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Mir5121-201ENSMUST00000198528 74 ntBASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.5□□□□□ -1.69
Chmp6P0C0A3 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.5□□□□□ -1.69
Chmp6P0C0A3 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Chmp6P0C0A3 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.5□□□□□ -1.69
Chmp6P0C0A3 AC154510.1-201ENSMUST00000223925 737 ntBASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Chmp6P0C0A3 AC159476.1-201ENSMUST00000215914 1668 ntBASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Chmp6P0C0A3 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Chmp6P0C0A3 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Chmp6P0C0A3 AC159188.2-201ENSMUST00000224103 1301 ntBASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Gm24541-201ENSMUST00000103871 96 ntBASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Gm23178-201ENSMUST00000116782 95 ntBASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Gm6893-201ENSMUST00000118385 522 ntBASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Klra11-ps-201ENSMUST00000122033 810 ntBASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Gm15075-201ENSMUST00000122187 477 ntBASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Gm22453-201ENSMUST00000122801 318 ntBASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Gm25966-201ENSMUST00000157169 117 ntBASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Gm22156-201ENSMUST00000158409 141 ntBASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Gm23215-201ENSMUST00000178153 121 ntBASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Gm29281-201ENSMUST00000188077 381 ntBASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Gm37934-201ENSMUST00000192902 402 ntBASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Ighv10-4-201ENSMUST00000193702 299 ntBASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Gm4045-201ENSMUST00000204076 310 ntBASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Gm45032-201ENSMUST00000205375 520 ntBASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Chmp6P0C0A3 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Gm13664-201ENSMUST00000117304 345 ntBASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Gm13902-201ENSMUST00000120168 605 ntBASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Gm22637-201ENSMUST00000158144 283 ntBASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Mir3473a-201ENSMUST00000175011 78 ntBASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Gm28304-201ENSMUST00000185977 312 ntBASIC4.48□□□□□ -1.69
Chmp6P0C0A3 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Gm29256-201ENSMUST00000189094 312 ntBASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Gm28484-201ENSMUST00000190606 312 ntBASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Gm38270-201ENSMUST00000192721 407 ntBASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Gm36997-201ENSMUST00000195090 707 ntBASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Gm3213-201ENSMUST00000219296 441 ntBASIC4.48□□□□□ -1.69
Chmp6P0C0A3 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Gm26449-201ENSMUST00000082452 104 ntBASIC4.48□□□□□ -1.69
Chmp6P0C0A3 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.48□□□□□ -1.69
Chmp6P0C0A3 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms