Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col3a1P08121 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col3a1P08121 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.97□□□□□ -1.61
Col3a1P08121 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col3a1P08121 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
Col3a1P08121 Gm25833-201ENSMUST00000104137 133 ntBASIC4.96□□□□□ -1.62
Col3a1P08121 Gm12335-201ENSMUST00000119738 327 ntBASIC4.96□□□□□ -1.62
Col3a1P08121 Gm12087-201ENSMUST00000121878 258 ntBASIC4.96□□□□□ -1.62
Col3a1P08121 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC4.96□□□□□ -1.62
Col3a1P08121 Gm23959-201ENSMUST00000157208 324 ntBASIC4.96□□□□□ -1.62
Col3a1P08121 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC4.96□□□□□ -1.62
Col3a1P08121 Gm23365-201ENSMUST00000175019 125 ntBASIC4.96□□□□□ -1.62
Col3a1P08121 Gm25960-201ENSMUST00000175110 125 ntBASIC4.96□□□□□ -1.62
Col3a1P08121 Gm44453-201ENSMUST00000175161 126 ntBASIC4.96□□□□□ -1.62
Col3a1P08121 Gm25195-201ENSMUST00000177656 126 ntBASIC4.96□□□□□ -1.62
Col3a1P08121 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Col3a1P08121 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC4.96□□□□□ -1.62
Col3a1P08121 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC4.96□□□□□ -1.62
Col3a1P08121 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC4.96□□□□□ -1.62
Col3a1P08121 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Col3a1P08121 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.96□□□□□ -1.62
Col3a1P08121 Gm37300-201ENSMUST00000193327 280 ntBASIC4.96□□□□□ -1.62
Col3a1P08121 Gm45636-201ENSMUST00000210497 1064 ntBASIC4.96□□□□□ -1.62
Col3a1P08121 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.96□□□□□ -1.62
Col3a1P08121 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.96□□□□□ -1.62
Col3a1P08121 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC4.96□□□□□ -1.62
Col3a1P08121 AL590503.1-201ENSMUST00000222053 321 ntBASIC4.96□□□□□ -1.62
Col3a1P08121 Gm19154-201ENSMUST00000223330 940 ntBASIC4.96□□□□□ -1.62
Col3a1P08121 AC134577.1-201ENSMUST00000227572 295 ntBASIC4.96□□□□□ -1.62
Col3a1P08121 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Col3a1P08121 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Col3a1P08121 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Col3a1P08121 Gm25481-201ENSMUST00000083221 158 ntBASIC4.96□□□□□ -1.62
Col3a1P08121 Mir215-201ENSMUST00000083628 112 ntBASIC4.96□□□□□ -1.62
Col3a1P08121 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Col3a1P08121 Gm13230-201ENSMUST00000120870 1575 ntBASIC4.96□□□□□ -1.62
Col3a1P08121 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
Col3a1P08121 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col3a1P08121 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Col3a1P08121 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC4.96□□□□□ -1.62
Col3a1P08121 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.96□□□□□ -1.62
Col3a1P08121 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Col3a1P08121 Gm12586-201ENSMUST00000117328 1316 ntBASIC4.96□□□□□ -1.62
Col3a1P08121 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col3a1P08121 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col3a1P08121 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Col3a1P08121 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col3a1P08121 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Col3a1P08121 Gm42736-201ENSMUST00000200723 1353 ntBASIC4.95□□□□□ -1.62
Col3a1P08121 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col3a1P08121 Gm11212-201ENSMUST00000118337 618 ntBASIC4.95□□□□□ -1.62
Col3a1P08121 Gm14840-201ENSMUST00000122135 594 ntBASIC4.95□□□□□ -1.62
Col3a1P08121 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Col3a1P08121 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Col3a1P08121 Gm2862-201ENSMUST00000161524 328 ntBASIC4.95□□□□□ -1.62
Col3a1P08121 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.95□□□□□ -1.62
Col3a1P08121 Gm21045-201ENSMUST00000183058 1020 ntBASIC4.95□□□□□ -1.62
Col3a1P08121 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Col3a1P08121 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Col3a1P08121 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Col3a1P08121 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Col3a1P08121 Gm19908-201ENSMUST00000204684 391 ntBASIC4.95□□□□□ -1.62
Col3a1P08121 Gm4036-201ENSMUST00000220842 626 ntBASIC4.95□□□□□ -1.62
Col3a1P08121 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.95□□□□□ -1.62
Col3a1P08121 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col3a1P08121 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col3a1P08121 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col3a1P08121 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col3a1P08121 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col3a1P08121 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col3a1P08121 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Col3a1P08121 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col3a1P08121 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Col3a1P08121 AC154323.3-201ENSMUST00000226927 1660 ntBASIC4.95□□□□□ -1.62
Col3a1P08121 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.95□□□□□ -1.62
Col3a1P08121 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col3a1P08121 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col3a1P08121 Gm15018-201ENSMUST00000117090 633 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Gm14605-201ENSMUST00000120599 268 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Gm15529-201ENSMUST00000121833 994 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Gm14253-201ENSMUST00000122112 639 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Gm11834-201ENSMUST00000122257 585 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC4.94□□□□□ -1.62
Col3a1P08121 Gm23198-201ENSMUST00000158811 91 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Gm16290-201ENSMUST00000161175 474 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Gm27845-201ENSMUST00000184479 114 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col3a1P08121 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Ighv8-1-201ENSMUST00000194897 291 ntBASIC4.94□□□□□ -1.62
Col3a1P08121 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC4.94□□□□□ -1.62
Col3a1P08121 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC4.94□□□□□ -1.62
Col3a1P08121 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC4.94□□□□□ -1.62
Col3a1P08121 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms