Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm3077-201ENSMUST00000165903 627 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Hmgb3O54879 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC3.26□□□□□ -1.89
Hmgb3O54879 Gm28655-201ENSMUST00000191538 692 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 Gm43712-201ENSMUST00000198020 291 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 Gm43841-201ENSMUST00000199491 586 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 Gm43309-201ENSMUST00000200837 458 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 Gm6719-201ENSMUST00000202067 335 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.26□□□□□ -1.89
Hmgb3O54879 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
Hmgb3O54879 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC3.26□□□□□ -1.89
Hmgb3O54879 AC153526.4-201ENSMUST00000217713 379 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 Gm6056-201ENSMUST00000221253 488 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 AC154441.1-201ENSMUST00000223653 1006 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 CU024892.1-201ENSMUST00000224869 515 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC3.26□□□□□ -1.89
Hmgb3O54879 Mir337-201ENSMUST00000083592 97 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 n-R5s7-201ENSMUST00000083755 121 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Hmgb3O54879 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Hmgb3O54879 AC123858.1-201ENSMUST00000226948 1874 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Hmgb3O54879 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
Hmgb3O54879 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Hmgb3O54879 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
Hmgb3O54879 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC3.25□□□□□ -1.89
Hmgb3O54879 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Hmgb3O54879 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Hmgb3O54879 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm13607-201ENSMUST00000117875 539 ntBASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm15994-201ENSMUST00000118029 402 ntBASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm12638-201ENSMUST00000119531 298 ntBASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm12444-201ENSMUST00000121512 877 ntBASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm5353-201ENSMUST00000139800 793 ntBASIC3.25□□□□□ -1.89
Hmgb3O54879 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm26046-201ENSMUST00000157312 166 ntBASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm25669-201ENSMUST00000157699 112 ntBASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm23546-201ENSMUST00000158211 137 ntBASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm25606-201ENSMUST00000158363 95 ntBASIC3.25□□□□□ -1.89
Hmgb3O54879 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm27864-201ENSMUST00000183704 190 ntBASIC3.25□□□□□ -1.89
Hmgb3O54879 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.25□□□□□ -1.89
Hmgb3O54879 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC3.25□□□□□ -1.89
Hmgb3O54879 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.25□□□□□ -1.89
Hmgb3O54879 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC3.25□□□□□ -1.89
Hmgb3O54879 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm42758-201ENSMUST00000202146 283 ntBASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm44234-201ENSMUST00000204246 900 ntBASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm45458-201ENSMUST00000209900 522 ntBASIC3.25□□□□□ -1.89
Hmgb3O54879 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC3.25□□□□□ -1.89
Hmgb3O54879 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.25□□□□□ -1.89
Hmgb3O54879 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC3.25□□□□□ -1.89
Hmgb3O54879 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm36501-201ENSMUST00000221857 745 ntBASIC3.25□□□□□ -1.89
Hmgb3O54879 AC168881.1-201ENSMUST00000226018 430 ntBASIC3.25□□□□□ -1.89
Hmgb3O54879 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC3.25□□□□□ -1.89
Hmgb3O54879 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Hmgb3O54879 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Hmgb3O54879 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Hmgb3O54879 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Hmgb3O54879 Mir342-201ENSMUST00000083502 99 ntBASIC3.25□□□□□ -1.89
Hmgb3O54879 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Hmgb3O54879 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Hmgb3O54879 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Hmgb3O54879 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Hmgb3O54879 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Hmgb3O54879 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Hmgb3O54879 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Hmgb3O54879 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Hmgb3O54879 Mir680-1-201ENSMUST00000102257 109 ntBASIC3.24□□□□□ -1.89
Hmgb3O54879 Gm26387-201ENSMUST00000104238 132 ntBASIC3.24□□□□□ -1.89
Hmgb3O54879 Gm8666-201ENSMUST00000117517 292 ntBASIC3.24□□□□□ -1.89
Hmgb3O54879 Gm13501-201ENSMUST00000118477 979 ntBASIC3.24□□□□□ -1.89
Hmgb3O54879 Gm13220-201ENSMUST00000121535 508 ntBASIC3.24□□□□□ -1.89
Hmgb3O54879 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.24□□□□□ -1.89
Hmgb3O54879 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC3.24□□□□□ -1.89
Hmgb3O54879 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC3.24□□□□□ -1.89
Hmgb3O54879 Gm15534-201ENSMUST00000137642 562 ntBASIC3.24□□□□□ -1.89
Hmgb3O54879 Gm23231-201ENSMUST00000157299 104 ntBASIC3.24□□□□□ -1.89
Hmgb3O54879 Gm26352-201ENSMUST00000158223 125 ntBASIC3.24□□□□□ -1.89
Hmgb3O54879 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC3.24□□□□□ -1.89
Hmgb3O54879 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.24□□□□□ -1.89
Hmgb3O54879 Mir5110-201ENSMUST00000175537 87 ntBASIC3.24□□□□□ -1.89
Hmgb3O54879 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC3.24□□□□□ -1.89
Hmgb3O54879 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Hmgb3O54879 Gm27602-201ENSMUST00000183861 111 ntBASIC3.24□□□□□ -1.89
Hmgb3O54879 Gm27190-201ENSMUST00000184890 542 ntBASIC3.24□□□□□ -1.89
Hmgb3O54879 Gm8282-201ENSMUST00000187559 483 ntBASIC3.24□□□□□ -1.89
Hmgb3O54879 Gm37632-201ENSMUST00000191811 1142 ntBASIC3.24□□□□□ -1.89
Hmgb3O54879 Gm17775-201ENSMUST00000198542 258 ntBASIC3.24□□□□□ -1.89
Hmgb3O54879 Gm42526-201ENSMUST00000198956 393 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms