Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm7189-201ENSMUST00000119811 429 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm14875-201ENSMUST00000120881 319 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm13865-201ENSMUST00000120957 865 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm12340-201ENSMUST00000121617 462 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm12087-201ENSMUST00000121878 258 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Tnfsf11O35235 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Tnfsf11O35235 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm23587-201ENSMUST00000157658 84 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm24507-201ENSMUST00000157683 134 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm25906-201ENSMUST00000158489 126 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Adgrg4-206ENSMUST00000168724 531 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm18522-201ENSMUST00000173947 650 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Mir3110-201ENSMUST00000175053 80 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm21960-201ENSMUST00000181924 452 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm27165-201ENSMUST00000183951 232 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm9541-201ENSMUST00000188409 502 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm17981-201ENSMUST00000191109 739 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC3.36□□□□□ -1.87
Tnfsf11O35235 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm17954-201ENSMUST00000195893 607 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm42566-201ENSMUST00000197120 643 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm19065-202ENSMUST00000203910 1165 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm44138-201ENSMUST00000204939 271 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm45392-201ENSMUST00000210441 214 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm45857-201ENSMUST00000212207 356 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 AC156832.3-201ENSMUST00000215591 435 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 AC153932.1-201ENSMUST00000218558 787 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 AC132384.13-201ENSMUST00000219556 1159 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm40692-201ENSMUST00000220411 491 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC3.36□□□□□ -1.87
Tnfsf11O35235 CT009711.3-201ENSMUST00000225882 250 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Tnfsf11O35235 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Tnfsf11O35235 Snord21-201ENSMUST00000082519 94 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm45131-201ENSMUST00000208051 2582 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Synpr-207ENSMUST00000223583 3362 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm23424-201ENSMUST00000103889 110 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm22498-201ENSMUST00000104497 86 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm24067-201ENSMUST00000104514 85 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm13451-201ENSMUST00000117649 592 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm14878-201ENSMUST00000118167 293 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Defa-ps15-201ENSMUST00000118178 477 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm25179-201ENSMUST00000122632 128 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
Tnfsf11O35235 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC3.35□□□□□ -1.87
Tnfsf11O35235 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm14710-201ENSMUST00000146082 1066 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm16303-201ENSMUST00000161498 390 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Mir3473g-201ENSMUST00000183494 136 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm27543-201ENSMUST00000183562 177 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Mir7653-201ENSMUST00000184358 61 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm29513-201ENSMUST00000185741 202 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm37072-201ENSMUST00000194570 837 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm43712-201ENSMUST00000198020 291 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm44656-201ENSMUST00000208428 490 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm20586-201ENSMUST00000210122 547 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm7333-201ENSMUST00000213449 1060 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Prl7a1-203ENSMUST00000224852 1283 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Tnfsf11O35235 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm24031-201ENSMUST00000083930 131 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm12586-201ENSMUST00000117328 1316 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm37764-201ENSMUST00000194664 2150 ntBASIC3.35□□□□□ -1.87
Tnfsf11O35235 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms