Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm6261-201ENSMUST00000204707 760 ntBASIC3.31□□□□□ -1.88
Col6a4A2AX52 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC3.31□□□□□ -1.88
Col6a4A2AX52 AV026068-237ENSMUST00000226075 572 ntBASIC3.31□□□□□ -1.88
Col6a4A2AX52 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Gm13230-201ENSMUST00000120870 1575 ntBASIC3.31□□□□□ -1.88
Col6a4A2AX52 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC3.31□□□□□ -1.88
Col6a4A2AX52 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Gm14861-201ENSMUST00000119451 455 ntBASIC3.31□□□□□ -1.88
Col6a4A2AX52 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Gm14534-201ENSMUST00000120045 357 ntBASIC3.31□□□□□ -1.88
Col6a4A2AX52 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Gm22857-201ENSMUST00000174969 134 ntBASIC3.31□□□□□ -1.88
Col6a4A2AX52 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC3.31□□□□□ -1.88
Col6a4A2AX52 Gm3454-201ENSMUST00000185571 412 ntBASIC3.31□□□□□ -1.88
Col6a4A2AX52 Gm29045-201ENSMUST00000187278 698 ntBASIC3.31□□□□□ -1.88
Col6a4A2AX52 Gm37617-201ENSMUST00000194309 159 ntBASIC3.31□□□□□ -1.88
Col6a4A2AX52 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC3.31□□□□□ -1.88
Col6a4A2AX52 AC159622.1-201ENSMUST00000221004 554 ntBASIC3.31□□□□□ -1.88
Col6a4A2AX52 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Col6a4A2AX52 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm45137-201ENSMUST00000208652 4415 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a4A2AX52 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
Col6a4A2AX52 Mir673-201ENSMUST00000102361 91 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col6a4A2AX52 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm15268-201ENSMUST00000118845 352 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm15231-201ENSMUST00000119174 447 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm14776-201ENSMUST00000121029 887 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC3.3□□□□□ -1.88
Col6a4A2AX52 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm36998-201ENSMUST00000193205 704 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm44513-201ENSMUST00000206811 439 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm23510-201ENSMUST00000083083 163 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Mir105-201ENSMUST00000104655 80 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm8757-201ENSMUST00000119660 372 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm24008-201ENSMUST00000157733 138 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm23964-201ENSMUST00000157966 107 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a4A2AX52 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.3□□□□□ -1.88
Col6a4A2AX52 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Mir6938-201ENSMUST00000184173 63 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Mir6914-201ENSMUST00000184999 69 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm27249-201ENSMUST00000185049 328 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm7142-201ENSMUST00000194232 586 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm17887-201ENSMUST00000200194 547 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm43929-201ENSMUST00000203025 409 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC3.3□□□□□ -1.88
Col6a4A2AX52 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col6a4A2AX52 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a4A2AX52 Gm22739-201ENSMUST00000083437 160 ntBASIC3.3□□□□□ -1.88
Col6a4A2AX52 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col6a4A2AX52 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a4A2AX52 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col6a4A2AX52 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a4A2AX52 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col6a4A2AX52 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC3.29□□□□□ -1.88
Col6a4A2AX52 Gm8674-201ENSMUST00000179367 3047 ntBASIC3.29□□□□□ -1.88
Col6a4A2AX52 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a4A2AX52 Gm37639-201ENSMUST00000191623 2785 ntBASIC3.29□□□□□ -1.88
Col6a4A2AX52 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a4A2AX52 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col6a4A2AX52 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a4A2AX52 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
Col6a4A2AX52 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col6a4A2AX52 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.29□□□□□ -1.88
Col6a4A2AX52 Gm24636-201ENSMUST00000158673 288 ntBASIC3.29□□□□□ -1.88
Col6a4A2AX52 Gm5258-201ENSMUST00000165437 327 ntBASIC3.29□□□□□ -1.88
Col6a4A2AX52 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms