Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Gm5963-201ENSMUST00000143451 236 ntBASIC4.9□□□□□ -1.63
Smc1aQ9CU62 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Gm24689-201ENSMUST00000157760 104 ntBASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Gm24905-201ENSMUST00000158129 104 ntBASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Gm26362-201ENSMUST00000158865 315 ntBASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Gm17153-201ENSMUST00000171314 490 ntBASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Smc1aQ9CU62 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Gm4557-201ENSMUST00000185826 907 ntBASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Gm4526-201ENSMUST00000186039 920 ntBASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Gm8708-201ENSMUST00000188500 906 ntBASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Gm36382-201ENSMUST00000198892 541 ntBASIC4.9□□□□□ -1.63
Smc1aQ9CU62 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.9□□□□□ -1.63
Smc1aQ9CU62 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.9□□□□□ -1.63
Smc1aQ9CU62 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Gm23928-201ENSMUST00000082469 145 ntBASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Gm23099-201ENSMUST00000083454 139 ntBASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Smc1aQ9CU62 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Smc1aQ9CU62 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Smc1aQ9CU62 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Gm23481-201ENSMUST00000104173 131 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Gm12577-201ENSMUST00000119701 574 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Gm22211-201ENSMUST00000158097 156 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Gm27883-201ENSMUST00000183941 102 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Gm29320-201ENSMUST00000185235 615 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Gm29179-202ENSMUST00000186138 615 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Gm29448-201ENSMUST00000186675 615 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Gm29314-201ENSMUST00000186800 615 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Gm28253-202ENSMUST00000187971 615 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Gm29169-201ENSMUST00000189835 615 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Gm2522-201ENSMUST00000204280 322 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.89□□□□□ -1.63
Smc1aQ9CU62 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC4.89□□□□□ -1.63
Smc1aQ9CU62 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 AC117656.3-205ENSMUST00000224606 1205 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Smc1aQ9CU62 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Smc1aQ9CU62 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Gm38375-201ENSMUST00000194610 2227 ntBASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Gm23178-201ENSMUST00000116782 95 ntBASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Gm14586-201ENSMUST00000119571 408 ntBASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Gm11349-201ENSMUST00000122209 1116 ntBASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Gm13092-201ENSMUST00000136346 260 ntBASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Gm16545-201ENSMUST00000161968 463 ntBASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Gm18406-201ENSMUST00000185872 669 ntBASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Gm29479-201ENSMUST00000190352 455 ntBASIC4.88□□□□□ -1.63
Smc1aQ9CU62 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC4.88□□□□□ -1.63
Smc1aQ9CU62 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Gm44650-201ENSMUST00000206929 194 ntBASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Gm45499-201ENSMUST00000211656 280 ntBASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.88□□□□□ -1.63
Smc1aQ9CU62 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Smc1aQ9CU62 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.88□□□□□ -1.63
Smc1aQ9CU62 AC154592.1-201ENSMUST00000225784 574 ntBASIC4.88□□□□□ -1.63
Smc1aQ9CU62 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms