Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4□□□□□ -1.77
Use1Q9CQ56 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Use1Q9CQ56 Mir7235-201ENSMUST00000183796 56 ntBASIC4□□□□□ -1.77
Use1Q9CQ56 Gm27427-201ENSMUST00000185134 193 ntBASIC4□□□□□ -1.77
Use1Q9CQ56 Gm28503-201ENSMUST00000185966 147 ntBASIC4□□□□□ -1.77
Use1Q9CQ56 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC4□□□□□ -1.77
Use1Q9CQ56 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC4□□□□□ -1.77
Use1Q9CQ56 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4□□□□□ -1.77
Use1Q9CQ56 Mir6994-201ENSMUST00000198985 73 ntBASIC4□□□□□ -1.77
Use1Q9CQ56 Gm43730-201ENSMUST00000199863 372 ntBASIC4□□□□□ -1.77
Use1Q9CQ56 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4□□□□□ -1.77
Use1Q9CQ56 Gm29815-201ENSMUST00000202418 178 ntBASIC4□□□□□ -1.77
Use1Q9CQ56 Gm18452-201ENSMUST00000202968 1111 ntBASIC4□□□□□ -1.77
Use1Q9CQ56 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC4□□□□□ -1.77
Use1Q9CQ56 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC4□□□□□ -1.77
Use1Q9CQ56 Gm45651-201ENSMUST00000210857 335 ntBASIC4□□□□□ -1.77
Use1Q9CQ56 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC4□□□□□ -1.77
Use1Q9CQ56 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4□□□□□ -1.77
Use1Q9CQ56 Gm7045-201ENSMUST00000221466 605 ntBASIC4□□□□□ -1.77
Use1Q9CQ56 Gm17915-201ENSMUST00000222077 548 ntBASIC4□□□□□ -1.77
Use1Q9CQ56 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4□□□□□ -1.77
Use1Q9CQ56 AC133598.4-202ENSMUST00000225267 469 ntBASIC4□□□□□ -1.77
Use1Q9CQ56 AC117949.2-201ENSMUST00000225900 584 ntBASIC4□□□□□ -1.77
Use1Q9CQ56 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
Use1Q9CQ56 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC4□□□□□ -1.77
Use1Q9CQ56 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Use1Q9CQ56 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Use1Q9CQ56 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4□□□□□ -1.77
Use1Q9CQ56 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Use1Q9CQ56 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Use1Q9CQ56 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC4□□□□□ -1.77
Use1Q9CQ56 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Use1Q9CQ56 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Use1Q9CQ56 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Use1Q9CQ56 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Use1Q9CQ56 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Use1Q9CQ56 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.99□□□□□ -1.77
Use1Q9CQ56 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Use1Q9CQ56 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Use1Q9CQ56 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Use1Q9CQ56 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Use1Q9CQ56 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC3.99□□□□□ -1.77
Use1Q9CQ56 Gm43197-201ENSMUST00000201493 2583 ntBASIC3.99□□□□□ -1.77
Use1Q9CQ56 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Use1Q9CQ56 Gm24117-201ENSMUST00000103973 133 ntBASIC3.99□□□□□ -1.77
Use1Q9CQ56 Gm23014-201ENSMUST00000104144 130 ntBASIC3.99□□□□□ -1.77
Use1Q9CQ56 Gm23608-201ENSMUST00000104545 128 ntBASIC3.99□□□□□ -1.77
Use1Q9CQ56 n-R5s16-201ENSMUST00000104555 119 ntBASIC3.99□□□□□ -1.77
Use1Q9CQ56 Gm14890-201ENSMUST00000117660 676 ntBASIC3.99□□□□□ -1.77
Use1Q9CQ56 Gm11878-201ENSMUST00000117908 400 ntBASIC3.99□□□□□ -1.77
Use1Q9CQ56 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC3.99□□□□□ -1.77
Use1Q9CQ56 Gm12340-201ENSMUST00000121617 462 ntBASIC3.99□□□□□ -1.77
Use1Q9CQ56 Gm24965-201ENSMUST00000157922 106 ntBASIC3.99□□□□□ -1.77
Use1Q9CQ56 Gm26171-201ENSMUST00000158422 131 ntBASIC3.99□□□□□ -1.77
Use1Q9CQ56 Gm17086-201ENSMUST00000171346 484 ntBASIC3.99□□□□□ -1.77
Use1Q9CQ56 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC3.99□□□□□ -1.77
Use1Q9CQ56 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC3.99□□□□□ -1.77
Use1Q9CQ56 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC3.99□□□□□ -1.77
Use1Q9CQ56 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC3.99□□□□□ -1.77
Use1Q9CQ56 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC3.99□□□□□ -1.77
Use1Q9CQ56 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Use1Q9CQ56 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Use1Q9CQ56 Gm37676-201ENSMUST00000195496 507 ntBASIC3.99□□□□□ -1.77
Use1Q9CQ56 Gm4859-201ENSMUST00000199625 787 ntBASIC3.99□□□□□ -1.77
Use1Q9CQ56 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC3.99□□□□□ -1.77
Use1Q9CQ56 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC3.99□□□□□ -1.77
Use1Q9CQ56 Gm44184-201ENSMUST00000204290 132 ntBASIC3.99□□□□□ -1.77
Use1Q9CQ56 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Use1Q9CQ56 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC3.99□□□□□ -1.77
Use1Q9CQ56 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC3.99□□□□□ -1.77
Use1Q9CQ56 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Use1Q9CQ56 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.99□□□□□ -1.77
Use1Q9CQ56 AC152162.1-201ENSMUST00000225910 2917 ntBASIC3.99□□□□□ -1.77
Use1Q9CQ56 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Use1Q9CQ56 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Use1Q9CQ56 Gm45131-201ENSMUST00000208051 2582 ntBASIC3.99□□□□□ -1.77
Use1Q9CQ56 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Use1Q9CQ56 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.98□□□□□ -1.77
Use1Q9CQ56 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC3.98□□□□□ -1.77
Use1Q9CQ56 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Use1Q9CQ56 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Use1Q9CQ56 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Use1Q9CQ56 Mir92b-201ENSMUST00000102300 83 ntBASIC3.98□□□□□ -1.77
Use1Q9CQ56 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Use1Q9CQ56 Gm25537-201ENSMUST00000103851 109 ntBASIC3.98□□□□□ -1.77
Use1Q9CQ56 Gm26019-201ENSMUST00000104407 119 ntBASIC3.98□□□□□ -1.77
Use1Q9CQ56 Gm14067-201ENSMUST00000119340 314 ntBASIC3.98□□□□□ -1.77
Use1Q9CQ56 Gm14710-201ENSMUST00000146082 1066 ntBASIC3.98□□□□□ -1.77
Use1Q9CQ56 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC3.98□□□□□ -1.77
Use1Q9CQ56 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Use1Q9CQ56 Mir5103-201ENSMUST00000175111 79 ntBASIC3.98□□□□□ -1.77
Use1Q9CQ56 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC3.98□□□□□ -1.77
Use1Q9CQ56 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC3.98□□□□□ -1.77
Use1Q9CQ56 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC3.98□□□□□ -1.77
Use1Q9CQ56 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC3.98□□□□□ -1.77
Use1Q9CQ56 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC3.98□□□□□ -1.77
Use1Q9CQ56 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC3.98□□□□□ -1.77
Use1Q9CQ56 Gm18800-202ENSMUST00000188688 1105 ntBASIC3.98□□□□□ -1.77
Use1Q9CQ56 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC3.98□□□□□ -1.77
Use1Q9CQ56 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.98□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms